Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq39 378 7e-100 seq339 154 2e-32 seq33 141 1e-28 seq220 111 2e-19 >seq39 Length=45975 Score = 378 bits (418), Expect = 7e-100 Identities = 573/805 (71%), Gaps = 19/805 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| |||| ||||||||||||| ||||||| | |||| Sbjct 1919 ATCTGGCAAATGTACAAGAAGGCGCAGGCCTCGTTCTGGACCGCCGAGGAGATCAACCTC 1860 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752 | ||| ||||||||| | | ||||||||||||||| | || ||| || Sbjct 1859 GCGCCCGACCTCCACGACTGGGACAACAAGCTCAACGACAACGAGCGCTACTTTATCGAG 1800 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 |||||||| ||||||||||| ||| |||||||| ||||||||||| ||||||||||| Sbjct 1799 CACGTGCTTGCCTTTTTCGCGGCCTCTGACGGCATTGTCAACGAGAACCTGGTCGAGCGC 1740 Query 116813 TTCGCTCAGGAGGT--GCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 ||| || || ||| | |||||||| | ||||||||||| |||||| | Sbjct 1739 TTCTGCGGCGACGTCGGCA--TTGCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGA 1682 Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCT-CTTCG 116929 |||||||| | ||||| || | ||| ||| |||||||||||||||| | ||| | || Sbjct 1681 TGGAGAACATCCACTCTGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGACGGCG 1622 Query 116930 -GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | |||| || | | | | | || |||||||| || || ||| |||| ||||||| Sbjct 1621 AGCGCAGAAACTACCTCT--TCCAGGCGATCGAGACCATCCCCTGCATCAAGAAGAAGGC 1564 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 ||| ||||| || ||||||||| | | | | || | |||| | ||||||||| | || Sbjct 1563 CGACTGGGCCCTCCGCTGGATCACGGACGAAAAGTCGTCCTTTGCCGAGCGCCTTATTGC 1504 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||| || |||||||||||| ||||||| || ||| || ||| | || || |||||||| Sbjct 1503 CTTTGCAGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTTTGCCTCGATCTTCTGGCTCAA 1444 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| |||||||||||||||||||| || ||| ||||||||||||||| | |||||||| Sbjct 1443 GAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGG 1384 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG- 117227 || || |||||||||||| | || ||| ||| | || || || | ||| Sbjct 1383 CCTCCACACCGACTTTGCCTGCCTCCTCTTCTCGCACCTCCAGCGCCGCCCACACCCGGA 1324 Query 117228 --CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGA 117285 || || || |||| ||| || || ||| || ||||| ||||||||||| Sbjct 1323 CACGATCGCCA---AGATTATCAAGGAGGCCGTCAAGATTGAGCAAGAGTTCCTCACCGA 1267 Query 117286 AGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGT 117344 || || || || || | || | || || || | |||| || |||||||||| Sbjct 1266 CGCCCTCCCCGTCTCGCTCATCGGCATGAA-CGCCAAGCTCATGTGCCAGTACATCGAGT 1208 Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404 | ||||||||| | || || ||| ||| | | || ||| || ||| | | |||| Sbjct 1207 TTGTCGCCGACCGTCTCCTCGTCGCGCTCGGCAACGAAAAGATCTGGAACTCTACAAACC 1148 Query 117405 CGCTGGACTTTATGAACCTCATCTC 117429 | | ||||||||| | | ||||| Sbjct 1147 CATTCGACTTTATGGAGATGATCTC 1123 >seq339 Length=62760 Score = 154 bits (170), Expect = 2e-32 Identities = 172/227 (76%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750 |||| || ||||| || || ||||||||||| ||||||||| | || ||||| || | | Sbjct 1409 TGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGG 1468 Query 40751 ACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | || |||| ||||| || || | ||||| |||||||||||| | |||||| Sbjct 1469 ACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 1527 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| ||||| ||||| || |||| |||||||| ||||||||| Sbjct 1528 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 1587 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || || || | ||| || | || || Sbjct 1588 ATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGCCTGCGTGGTGG 1634 >seq33 Length=47741 Score = 141 bits (156), Expect = 1e-28 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| ||||||||| |||| ||||| | | Sbjct 11910 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGTCTTCG 11969 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||||||| | ||||| Sbjct 11970 GACACCATTGACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 12028 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| |||||||| ||||| || || | |||||||| ||||||||| Sbjct 12029 GCAGCGCCTTATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAA 12088 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 12089 CATCCAGAAGGAGTCGACTCTTCACCTCGT 12118 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || ||||| ||||| ||||||||| |||| ||||| || Sbjct 11633 AAGATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCC 11692 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | |||| ||||| || || | ||||| |||||||||||| | || Sbjct 11693 TCGGACACTATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 11751 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || ||||||| ||| ||||| ||||| || |||| ||||||||| |||||| Sbjct 11752 CCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTA 11811 Query 40866 CA 40867 || Sbjct 11812 CA 11813 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || |||||||| || ||||||||||| ||||| || |||| || || | || Sbjct 12138 ATGCAGATCTTCGTAAAGACCCTCACGGGCAAGACCATTACGCTCGAGGTTGAGTCTTCC 12197 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| ||||| |||||| | ||||| Sbjct 12198 GACACGATCGACAACG-TCAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCTGACCA 12256 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| |||||||| ||||| || |||| || || || ||||||||| Sbjct 12257 GCAGCGCTTGATCTTTGCGGGCAAGCAGCTCGAGGACGGACGTACGCTGTCCGACTACAA 12316 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || |||| Sbjct 12317 CATCCAGAAGGAGTCGACTTTGCA 12340 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || || |||||| | || ||||| || | Sbjct 12822 ATGCAGATCTTCGTCAAGACCTTGACCGGGAAGACGATCACCCTGGAAGTCGAGTCCTCT 12881 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| ||||| | |||||| Sbjct 12882 GACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 12941 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| ||||| ||||| || |||| ||||| |||| |||||||||| Sbjct 12942 CAGCGCCTCATTTTCGCAGGCAAGCAGCTCGAAGACGGCCGCACGCTCAGCGACTACAAC 13001 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | || || || || ||| | || | | |||||| Sbjct 13002 ATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGTCTCCGTGGCGGC 13049 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || || || ||||| || || || | || || || | | Sbjct 12593 AATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACAATTACTTTGGAAGTGGAGTCGTC 12652 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||||| | | | |||| | ||| ||| || | ||||| ||||| ||||| | |||| Sbjct 12653 CGACACCATTGACAACG-TAAAGTCAAAGATCCAGGACAAGGAGGGTATCCCGCCCGACC 12711 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || || |||| || || || ||||| || |||| ||||||||| |||||||| Sbjct 12712 AGCAGCGTCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACA 12771 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||| | || || || || || Sbjct 12772 ACATCCAGAAGGAGTCTACCCTCCACCTTGT 12802 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || ||||| || |||| ||||| | || Sbjct 12366 ATGCAGATCTTCGTCAAGACTCTTACCGGGAAGACCATTACTCTCGAGGTCGAGTCGTCC 12425 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || || | ||||| ||||| |||||| | ||||| Sbjct 12426 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAA 12485 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| || || ||||| || || | || || || |||||||||| Sbjct 12486 CAGCGTCTCATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACTCTTTCCGACTACAAC 12545 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| |||| || || || || |||| Sbjct 12546 ATCCAGAAGGAGTCCACCCTCCACCTCGTCCTGCG 12580 >seq220 Length=16629 Score = 111 bits (122), Expect = 2e-19 Identities = 153/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 ||||||| || ||||| || | ||| | | | |||| ||| ||| || ||| | Sbjct 15534 AGAAGGCGGATTGGGCTCTCAAGTACATCTC-GCCCGAGATGCCT--TTCCGCACGCGAC 15478 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | | || ||||| |||||||||| | ||||| || ||| |||||| ||||| || | Sbjct 15477 TCATCGCATTCGCCTGCGTCGAGGGCATATTCTTCTCCGGCTCTTTCGCTGCCATTTTCT 15418 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || ||| | |||| ||||| || ||| ||||||||||||| | | | Sbjct 15417 GGCTCAAGAAGCGTGGCTTGATGCGAGGCCTCACCTTCTCCAACGAGCTCATCAGCCGCG 15358 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTG 117193 ||||||| |||| |||||||| || ||| Sbjct 15357 ACGAGGGAATGCACACAGACTTTGCATGCTTG 15326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515216920155040