Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq165 221 3e-52 seq303 131 4e-25 seq39 87.8 4e-12 >seq165 Length=23858 Score = 221 bits (244), Expect = 3e-52 Identities = 611/923 (66%), Gaps = 24/923 (3%) Strand=Plus/Plus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| || |||||| ||||| ||||| || | |||||| Sbjct 4769 TACAACTACTTTGGCTTCAAGACTCTGGAGCGCTCGTACCTCCTGCGCATCAACGGCAAG 4828 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 |||| || || ||||||||| | ||||| || ||||| || || ||| || || Sbjct 4829 ATCGCTGAGCGTCCCCAGCACATGATCATGCGTGTCGCTGTTGGTATCCACGGTGACAAC 4888 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| |||||||| |||| | ||| || |||| | || || || | Sbjct 4889 ATCGAGCGCGTCCTCGAGACCTACAACCTCATGTCGGAGCGCTATTTCACCCACGCTTCG 4948 Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCC 249057 || || ||||||||||| || || ||| ||| || || ||||| || | ||| Sbjct 4949 CCTACCCTCTTCAACGCTGGCACTCCCAATGCGCAGATGTCTTCTTGCTTCCTCGTCGCC 5008 Query 249058 ATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTC 249116 ||| | |||||||| | ||||| || || ||||| || || || | ||| |||| || Sbjct 5009 ATGAAGGACGACTCGATTGACGGTATCTACGACACCCTCAAGACCTGC-GCGCAGATCTC 5067 Query 249117 TAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACAT 249176 ||| || || || ||||||||| | || ||||||||| || ||||| |||||||| Sbjct 5068 TAAGACTGCCGGAGGTATCGGTCTCCACATCCACAACATCCGTGCCAAGGGCTCGTACAT 5127 Query 249177 CAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCAC 249236 || || || || | | |||||||| ||| | || || || || | || Sbjct 5128 TTCGGGAACCAACGGTTACTCCAACGGTATCGTCCCCATGCTCCGTGCCTACGACGCGAC 5187 Query 249237 CGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTT 249290 || | | | || |||||| || ||||| || |||| ||||| ||| | Sbjct 5188 TGCGCGTTACGTCGACCAGGGTGGTAACAAGCGCC---CCGGTGCGTTTGCCATCTATCT 5244 Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350 || ||||||||||| | || || ||||| ||| ||| |||||| ||||||| || Sbjct 5245 CGAGCCATGGCACGCCGACGTCTTTGACTTCCTTGACCTGAGGAAGAACCACGGCAAGGA 5304 Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410 | | | || |||||||||||||||| || ||| || ||||| | |||||| || Sbjct 5305 GGAGGTCCGTGCCCGTGACCTCTTCTACGCTCTCTGGATCCCCGACCTCTTCATGAAGCG 5364 Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATCG 249469 ||| || ||||| || ||||| || | | || |||| ||||||| |||| || Sbjct 5365 TGTCGAGCAGGACGGTGACTGGACACTCATGTGCCCCGCCGAGTGCCCCGG-CCTCGCCG 5423 Query 249470 ATCTACACGGCGCCGACTTCGACCAAGC-CTATAAGAAATACGAATCCAACGGCATCG-- 249526 | | ||| | || || || |||| || ||| ||||| |||| | Sbjct 5424 ACGTCCACTCTGAGGAGTTTGA-GAAGCTGTACGAGAGCTACGAGAAGGCTGGCAAGGGT 5482 Query 249527 -GCAAGACAATCAAGGCTCGGACCCTTT--TTGCGAAGGTGGTGGAGTCCCAGATAGAGA 249583 ||||||| |||||||| | || || | || | | | ||| |||||| |||| Sbjct 5483 CGCAAGACCATCAAGGCGCAGAAGCTGTGGTTCTCCA--TCCTCGAGGCCCAGACCGAGA 5540 Query 249584 CAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCAT 249642 | || || || | | || | | ||| || || |||| ||||| ||||| | ||| Sbjct 5541 CTGGTGGTCCCT-TCATCCTCTACAAGGATGCCGCCAACTCCAAGTCCAACCAGCAGCAC 5599 Query 249643 CTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGAG 249702 || || |||||| ||||| || || || | ||| | || | |||||||| || Sbjct 5600 CTCGGCACCATCAAGTCGTCCAACCTGTGCACTGAGATTATCGAGTACTCGTCGCCCGAC 5659 Query 249703 GAGATTGCCGTCTGCAACCTGGC 249725 ||| | |||||||||||||| || Sbjct 5660 GAGGTCGCCGTCTGCAACCTTGC 5682 >seq303 Length=80140 Score = 131 bits (144), Expect = 4e-25 Identities = 213/305 (70%), Gaps = 25/305 (8%) Strand=Plus/Minus Query 254100 CGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATC 254159 |||||||| ||||| ||||| || ||||| ||||| | |||||||| || |||||| Sbjct 4106 CGCGTGCTAGAGCTCAACGCCTCCGACGAGCGCGGTATCTCAGTCGTCCGTGAGAAGATC 4047 Query 254160 AAGACTTTCTCCA---AGATG----------TCG--ATTTCGTC-GTT-------CCAAC 254196 ||||| ||| || ||| | ||| || || || | | || || Sbjct 4046 AAGACCTTCGCCCGCGAGACGCCCCGCAACGTCGGCATCTCTTCCGATGGGAAAACCTAC 3987 Query 254197 CCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACG 254256 || || ||||| | ||||||| | ||||| ||||| || ||| |||||||| |||| Sbjct 3986 CCCGCC--CCGCCGTACAAGCTCATCATCCTCGACGAAGCCGACTCCATGACGCAGGACG 3929 Query 254257 CGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGG 254316 ||||||||||||||||||| | ||||||||| ||||| | ||||| || ||||| | Sbjct 3928 CGCAGTCCGCCCTCCGCCGCATTATGGAGACGTACTCCCGCATCACGCGCTTCTGCCTCG 3869 Query 254317 TGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGAT 254376 | || |||||||| || || |||| || || || || || || |||||| || | Sbjct 3868 TCTGTAACTACGTCACGCGCATTATCGAGCCCCTCGCGTCGCGTTGTAGCAAGTTCCGCT 3809 Query 254377 TCAGC 254381 || || Sbjct 3808 TCCGC 3804 >seq39 Length=45975 Score = 87.8 bits (96), Expect = 4e-12 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 157276 CTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACTCGAATGGGTTGGC 157335 ||| |||||||||| ||| |||||||| || ||||| ||||| | ||||||||||| | Sbjct 1095 CTCGAAAAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATAAAGTCGAATGGGTTTGT 1154 Query 157336 GCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTAGTCCGCCACAAACTTGAT 157395 |||| | | ||| |||| || ||| | || ||| || ||||||| ||| Sbjct 1155 AGAGTTCCAGATCTTTTCGTTGCCGAGCGCGACGAGGAGACGGTCGGCGACAAACTCGAT 1214 Query 157396 GTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCGCGACGGGAAGCGC 157446 ||||| |||| ||| || | || |||||||||| |||||| || || Sbjct 1215 GTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGCGAGACGGGGAGGGC 1265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073761529798272