Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq165 114 2e-20 seq39 105 8e-18 >seq165 Length=23858 Score = 114 bits (126), Expect = 2e-20 Identities = 541/856 (63%), Gaps = 10/856 (1%) Strand=Plus/Minus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 || ||||| | | ||| || ||||| | || || || ||||| ||||| || || ||| Sbjct 5400 GGGCACATGAGTGTCCAGTCACCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGGATC 5341 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353 || ||||| || || || | | | ||||| || || ||||| | || Sbjct 5340 CAGAGAGCGTAGAAGAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTCCTCAGG 5281 Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413 || ||||| | | | || | ||||| || || | || ||||| | | || || Sbjct 5280 TCAAGGAAGTCAAAGACGTCGGCGTGCCATGGCTCGAGATAGATGGCAAACGCACCGGGG 5221 Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473 || ||||| || ||||| || | ||| | || || | || | | | ||| || Sbjct 5220 CGCTTGTTACCACCCTGGTCGACGTAACGCGCAGTCGCGTCGTAGGCACGGAGCATGGGG 5161 Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533 | |||||||| || ||| ||||| || || || || || ||||||| || || Sbjct 5160 ACGATACCGTTGGAGTAACCGTTGGTTCCCGAAATGTACGAGCCCTTGGCACGGATGTTG 5101 Query 63534 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63593 || ||||| || || || || | |||||||| ||||| || | ||| Sbjct 5100 TGGATGTGGAGACCGATACCTCCGGCAGTCTTAGAGATCTGCGCGCAGGTCTTGAGGGTG 5041 Query 63594 TCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63653 || ||||| || || || || || ||||| | || || || |||||| || Sbjct 5040 TCGTAGATACCGTCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCAAGAAGACATCTGC 4981 Query 63654 TGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63713 | | ||| || || || || | |||||| |||||||| || || | || || Sbjct 4980 GCATTGGGAGTGCCAGCGTTGAAGAGGGTAGGCGAAGCGTGGGTGAAATAGCGCTCCGAC 4921 Query 63714 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGAC 63772 | || ||||| ||||| | | || || | || | || || || || ||||| Sbjct 4920 ATGAGGTTGTAGGTCTCGAGGACGCGCTCGATGTTGTCACCG-TGGATACCAACAGCGAC 4862 Query 63773 ACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGA 63832 |||||| | ||||||||| || | ||| | || ||| ||| || || | ||| || Sbjct 4861 ACGCATGATCATGTGCTGGGGACGCTCAGCGATCTTGCCGTTGATGCGCAGGAGGTACGA 4802 Query 63833 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63892 |||| ||| || || ||||| |||||||| | |||||| || ||||| ||||| | Sbjct 4801 GCGCTCCAGAGTCTTGAAGCCAAAGTAGTTGTAGGCAAAGTCGCGGTCGTAGATAATGGC 4742 Query 63893 CGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACT----TGAAATAA 63948 ||| | ||||| |||||| | || | || | | | ||| || || || | Sbjct 4741 CGAGTCGAGCTCATCCTTGTGCTTCATGACAA----CCTCGTACACCTCGTCCGAGATCA 4686 Query 63949 TCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 64008 | || | | | || || | || || || || ||||| | | || | | || | Sbjct 4685 TAGGGGCACGCTTTCCTGTCTTGGGGTTGACCCAGTTGTACAGGTCGGCGACGACCTGCG 4626 Query 64009 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGG 64068 || | || || || |||||||| || || || ||||| || | ||||| ||||| | Sbjct 4625 AGAAGACCTTCTTGGTCTCCTTGTGGAGGTTGGAGATGGCAATACGAGCGGCGAGAATAG 4566 Query 64069 CATAATCCGGATGTTG 64084 |||||||||| || || Sbjct 4565 CATAATCCGGGTGCTG 4550 >seq39 Length=45975 Score = 105 bits (116), Expect = 8e-18 Identities = 176/252 (70%), Gaps = 3/252 (1%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||| || |||||||| | || | ||||| || || ||||| Sbjct 1363 CAGGCAAAGTCGGTGTGGAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGG 1422 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| ||||| ||||| || ||||| || || || || || || || || |||||| Sbjct 1423 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAG 1482 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCT--GTCATGT 33758 || || || || || |||||||||||||| | ||| || | || | | ||| Sbjct 1483 ATGCCCTCGACGGCTGCAAAGGCAATAAGGCGCTCGGCAAAGGACGACTTTTCGTCCGTG 1542 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 ||||| | ||||| ||||||||||| || | || || || || || || || | Sbjct 1543 ATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATCGCCTGG 1602 Query 33819 AAGAGATAGTTT 33830 ||||| |||||| Sbjct 1603 AAGAGGTAGTTT 1614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629814813057120