Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq33 105 7e-18 seq39 89.7 5e-13 >seq33 Length=47741 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 |||||||| || | ||| | || | ||| | || ||||| || || ||||| || ||| Sbjct 13051 TGGCCGCCACGGAGACGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 12992 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || | |||| |||||||||||| || || || | || || || ||||| |||||| Sbjct 12991 CTGAGCGTGCGGCCGTCTTCGAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGGTCGGGA 12932 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || || || || ||||| ||| || || | | || | ||||| | || ||| Sbjct 12931 GGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCG 12872 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || | ||| | |||||| |||||||| || || ||||| || |||||| Sbjct 12871 ACTTCCAGGGTGATCGTCTTCCCGGTCAAGGTCTTGACGAAGATCTGCATA 12821 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| | ||| | |||||||| || || ||||| || ||| | |||| ||| || Sbjct 12803 AACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTC 12744 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 |||||| || || ||| |||||||||| ||||| ||||| || || || || ||||| Sbjct 12743 GAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTG 12684 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 ||| ||| |||| | || | ||||||| | |||||| || | || | ||||| Sbjct 12683 GATCTTTGACTTTACGTTGTCAATGGTGTCGGACGACTCCACTTCCAAAGTAATTGTCTT 12624 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| || || || || || ||||| Sbjct 12623 GCCGGTCAGAGTCTTGACAAAGATCTGCAT 12594 >seq39 Length=45975 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 52834 AAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTG 52893 || ||||||||| | ||||| ||||||| | || ||||| | ||||| || | | Sbjct 1304 AAGGAGGCCGTCAAGATTGAGCAAGAGTTCCTCACCGACGCCCTCCCCGTCTCGCTCATC 1245 Query 52894 GGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATG 52953 ||||||||||| | | |||||| |||||||||||||||| || ||| | || | | Sbjct 1244 GGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGTCTCCTCGTC 1185 Query 52954 CAGCTCGGTCAGCCGAAATA-CTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACAT 53012 |||||| || | ||| | || || | ||||| || |||||| | | || Sbjct 1184 GCGCTCGG-CAACGAAAAGATCTGGAACTCTACAAACCCATTCGACTTTATGGAGATGAT 1126 Query 53013 ATCGCTCGAGGGCAAAACAAACTTTTTCGAG 53043 |||||| ||||||| | |||||||||||| Sbjct 1125 CTCGCTCCAGGGCAAGGCCAACTTTTTCGAG 1095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061804916800