Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq39 123 3e-23 seq165 116 5e-21 >seq39 Length=45975 Score = 123 bits (136), Expect = 3e-23 Identities = 275/408 (67%), Gaps = 5/408 (1%) Strand=Plus/Plus Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166 |||||||| || ||||| |||||||| ||||| ||||| || ||||| || || || ||| Sbjct 1405 TCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCA 1464 Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA- 42225 || || ||||| |||||||| || || || || |||||||||||||| | ||| || | Sbjct 1465 AACGAGCCAGAGAAGAAGATGCCCTCGACGGCTGCAAAGGCAATAAGGCGCTCGGCAAAG 1524 Query 42226 ACCGGCACT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 42283 || | | ||| ||||| | ||||| ||||||||||| || | || || Sbjct 1525 GACGACTTTTCGTCCGTGATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGG 1584 Query 42284 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCG 42343 || || || || || | ||||| |||||| | | | || | || || ||| Sbjct 1585 ATGGTCTCGATCGCCTGGAAGAGGTAGTTTCTGCGCTCGCCGTCGCGGATGTACGTGTCG 1644 Query 42344 ATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 42403 || | || ||| | || || || ||||| || || ||||| || |||||| || Sbjct 1645 ATGAGGAGCGAGTACGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAG-AA 1703 Query 42404 CATC-TGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCAC 42462 | || ||||||||| || || || || || || || | | || ||||| || Sbjct 1704 CGTCTTGGCCTCGGCAATGCCGACGTCGCCGCAGAAGCGCTCGACCAGGTTCTCGTTGAC 1763 Query 42463 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 42510 || |||||| ||| || ||||| || | || || | ||||| || Sbjct 1764 AATGCCGTCAGAGGCCGCGAAAAAGGCAAGCACGTGCTCGATAAAGTA 1811 >seq165 Length=23858 Score = 116 bits (128), Expect = 5e-21 Identities = 434/678 (64%), Gaps = 2/678 (0%) Strand=Plus/Minus Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 || ||||| | || ||| || || || | | || || ||||| ||||| || || ||| Sbjct 5400 GGGCACATGAGTGTCCAGTCACCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGGATC 5341 Query 72049 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 72108 || ||||| || || || | || | |||||| || || ||||| | || Sbjct 5340 CAGAGAGCGTAGAAGAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTCCTCAGG 5281 Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168 || ||||| | | | || | ||||| || || | || ||||| | | || || Sbjct 5280 TCAAGGAAGTCAAAGACGTCGGCGTGCCATGGCTCGAGATAGATGGCAAACGCACCGGGG 5221 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 || ||||| || ||||| || | ||| | || || | || | | | ||| || Sbjct 5220 CGCTTGTTACCACCCTGGTCGACGTAACGCGCAGTCGCGTCGTAGGCACGGAGCATGGGG 5161 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTG 72288 | ||||| ||||| ||| ||||| || || || || || ||||||| || ||| Sbjct 5160 ACGATACCGTTGGAGTAACCGTTGGTTCCCGAAATGTACGAGCCCTTGGCACGGATGTTG 5101 Query 72289 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 72348 || ||||| || || || || | |||||||| ||||| || | || Sbjct 5100 TGGATGTGGAGACCGATACCTCCGGCAGTCTTAGAGATCTGCGCGCAGGTCTTGAGGGTG 5041 Query 72349 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 72408 || ||||| || || || || ||| ||||| | || || || |||||| || Sbjct 5040 TCGTAGATACCGTCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCAAGAAGACATCTGC 4981 Query 72409 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 72468 | ||| || || || || | |||||| |||||||| || || | || ||| Sbjct 4980 GCATTGGGAGTGCCAGCGTTGAAGAGGGTAGGCGAAGCGTGGGTGAAATAGCGCTCCGAC 4921 Query 72469 AGTAGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTGATGTATTCCTACCGCGAC 72527 | || ||||| ||||| | | || || | || | || || || || ||||| Sbjct 4920 ATGAGGTTGTAGGTCTCGAGGACGCGCTCGATGTTGTCACCG-TGGATACCAACAGCGAC 4862 Query 72528 ACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGA 72587 |||||| | ||| ||||| || | ||| |||||||| || || || | ||| || Sbjct 4861 ACGCATGATCATGTGCTGGGGACGCTCAGCGATCTTGCCGTTGATGCGCAGGAGGTACGA 4802 Query 72588 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 72647 |||| ||| || || ||||| |||||||| | |||||| || ||||| ||||| | Sbjct 4801 GCGCTCCAGAGTCTTGAAGCCAAAGTAGTTGTAGGCAAAGTCGCGGTCGTAGATAATGGC 4742 Query 72648 CGAATTGAGTTTATCCTT 72665 ||| | ||| | |||||| Sbjct 4741 CGAGTCGAGCTCATCCTT 4724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136230209040