Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq39 262 6e-65 seq165 150 3e-31 >seq39 Length=45975 Score = 262 bits (290), Expect = 6e-65 Identities = 569/840 (68%), Gaps = 21/840 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||||||| || ||||| | ||| ||| || | || Sbjct 1919 ATCTGGCAAATGTACAAGAAGGCGCAGGCCTCGTTCTGGACCGCCGAGGAGATCAACCTC 1860 Query 125079 TCCAAGGACCTGTACGATTGGGAGA-CTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 | ||||| |||| ||||| | | | | || ||| ||||| | ||||| Sbjct 1859 GCGCCCGACCTCCACGACTGGGACAACAAGCTCAACGACAAC-GAGCGCTACTTTATCGA 1801 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197 |||| | | ||||| || || | ||| || || || |||||||| || ||| | || Sbjct 1800 GCACGTGCTTGCCTTTTTCGCGGCCTCTGACGGCATTGTCAACGAGAACCTGGTCGAGCG 1741 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 |||| || | |||| | |||| | || ||||| ||||| |||||||| Sbjct 1740 CTTCTGCGGCGACGTCGGCATTGCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGAT 1681 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCA 125317 |||||| | ||||| || | |||||| || || |||| |||||| ||||| | || Sbjct 1680 GGAGAACATCCACTCTGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGA-CGGCG 1622 Query 125318 A-CGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTC 125376 | || | | || ||||| | || ||||| || | || | || || ||||| Sbjct 1621 AGCGCAGAAACTACCTCTTCCAGGCGATCGAGACCATCCCCTGCATCAAGAAGAAGGCCG 1562 Query 125377 AATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCAT 125436 | |||| | || |||||| ||||| ||||| || | ||||| | || | || | Sbjct 1561 ACTGGGCCCTCCGCTGGATCACGGACGAAAAGTCGTCCTTTGCCGAGCGCCTTATTGCCT 1502 Query 125437 TCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGA 125496 | || ||||| |||||||||||||| || || ||||| | ||||| |||||||||| Sbjct 1501 TTGCAGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTTTGCCTCGATCTTCTGGCTCAAGA 1442 Query 125497 AGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCC 125556 ||||||| ||||||||||| || || | |||||| | || || || |||||||||| Sbjct 1441 AGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGGCC 1382 Query 125557 TACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGATCC 125615 | ||| ||||||||| || || || ||||| || | ||| | | || | || Sbjct 1381 TCCACACCGACTTTGCCTGCCTCCTCTTCTCGCACCT-CCAGCGCC----GCCCACACCC 1327 Query 125616 AGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTA 125675 || | | || ||| ||| | | || ||||| | ||| || |||||||| || Sbjct 1326 -----GGACACGATCGCCAAGATTATCAAGGAGGCCGTCAAGATTGAGCAAGAGTTCCTC 1272 Query 125676 ACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATA 125735 ||||| |||| || ||| | || ||||||||| |||||| |||||| ||||||| Sbjct 1271 ACCGACGCCCTCCCCGTCTCGCTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATC 1212 Query 125736 GAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACGCC 125792 |||||||| || || ||||| || || | | ||| || ||||| | ||| | Sbjct 1211 GAGTTTGTCGCCGACCGTCTCCT---CGTCGCGCTCGGCAACGAAAAGATCTGGAACTCT 1155 Query 125793 AAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAG 125852 | || || || || || ||| | || || || |||| ||| |||||||||||||| Sbjct 1154 ACAAACCCATTCGACTTTATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTTTTCGAG 1095 >seq165 Length=23858 Score = 150 bits (166), Expect = 3e-31 Identities = 344/511 (67%), Gaps = 10/511 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || || || || || || || | ||| |||| | || || |||||||| ||| Sbjct 5204 CAGGGTGGTAACAAGCGCCCCGGTGCGTTTGCCATCTATCTCGAGCCATGGCACGCCGAC 5263 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || |||||||| | || || | || ||| ||| || |||| || ||| | ||| Sbjct 5264 GTCTTTGACTTCCTTGACCTGAGGAAGAACCACGGCAAGGAGGAGGTCCGTGCCCGTGAC 5323 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC---GACGGTGGC 97052 | || || || |||||| | || || | ||||||||||| ||| | ||||||| Sbjct 5324 CTCTTCTACGCTCTCTGGATCCCCGACCTCTTCATGAAGCGTGTCGAGCAGGACGGTG-- 5381 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || |||||||||| | || ||||| || |||| | || ||| Sbjct 5382 -ACTGGACACTCATGTGCCCCGCCGAGTGCCCCGGCCTCGCCGACGTCCACTCTGAGGAG 5440 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAGTCGATGC 97171 |||||| |||| | ||||||| | | ||| | || |||| | || | || Sbjct 5441 TTTGAGAAGCTGTACGAGAGCTACGAGAAGGCTGGCAAGGGTCGCAAGACCA-TCAAGGC 5499 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| |||||| ||||| | ||| ||| |||||||| ||| | ||| | Sbjct 5500 GC-AGAAGCTGTGGTTCTCCATCCTCGAGGCCCAGACCGAGACTGGTGGTCCCTTCATCC 5558 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 ||||||||||| ||| || ||| |||||| | ||| | |||||||||||| | Sbjct 5559 TCTACAAGGATGCCGCCAACTCCAAGTCCAACCAGCAGCACCTCGGCACCATCAAGTCGT 5618 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 |||| |||||||| || ||| | |||||| | || || |||||| || || ||| | Sbjct 5619 CCAACCTGTGCACTGAGATTATCGAGTACTCGTCGCCCGACGAGGTCGCCGTCTGCAACC 5678 Query 97351 TGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 | || |||||| ||| ||| ||| || || Sbjct 5679 TTGCGTCGGTCGCTCTCCCCGCGTTCGTCGA 5709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055920813040