Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq39 127 3e-24 seq165 125 9e-24 >seq39 Length=45975 Score = 127 bits (140), Expect = 3e-24 Identities = 301/450 (67%), Gaps = 5/450 (1%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || ||| ||| || |||||||| | || || |||||||| || ||||| Sbjct 1363 CAGGCAAAGTCGGTGTGGAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGG 1422 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| ||||| ||||| || ||||| || || || || || || ||||| |||||| Sbjct 1423 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAG 1482 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCT--GTCATGT 33480 || || || || || |||||||||||||| | ||| || | || | | ||| Sbjct 1483 ATGCCCTCGACGGCTGCAAAGGCAATAAGGCGCTCGGCAAAGGACGACTTTTCGTCCGTG 1542 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 ||||| | ||||| ||||||||||| || | || || || || || || || | Sbjct 1543 ATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATCGCCTGG 1602 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 ||||| |||||| | | | || | || || ||||| | || ||| | Sbjct 1603 AAGAGGTAGTTTCTGCGCTCGCCGTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTC 1662 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATC-TAGCCTCGGTAAT 33659 || || || ||||| || || ||||| || |||||| ||| || | ||||||| ||| Sbjct 1663 TCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAG-AACGTCTTGGCCTCGGCAAT 1721 Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719 || || || || || || ||| || || || || || |||||| ||| || Sbjct 1722 GCCGACGTCGCCGCAGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCAGAGGCCGC 1781 Query 33720 AAAAAACGCCAATACATGTTTTATAAAATA 33749 ||||| || | || || | ||||| || Sbjct 1782 GAAAAAGGCAAGCACGTGCTCGATAAAGTA 1811 >seq165 Length=23858 Score = 125 bits (138), Expect = 9e-24 Identities = 436/678 (64%), Gaps = 2/678 (0%) Strand=Plus/Minus Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242 || ||||| | | ||| || ||||| | || || || ||||| ||||| || || ||| Sbjct 5400 GGGCACATGAGTGTCCAGTCACCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGGATC 5341 Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302 || ||||| || || || | || | ||||| || || ||||| | || Sbjct 5340 CAGAGAGCGTAGAAGAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTCCTCAGG 5281 Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362 || ||||| | | | || | ||||| || || | || ||||| | | || || Sbjct 5280 TCAAGGAAGTCAAAGACGTCGGCGTGCCATGGCTCGAGATAGATGGCAAACGCACCGGGG 5221 Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422 || ||||| || ||||| || | ||| | || || | || | | | ||| || Sbjct 5220 CGCTTGTTACCACCCTGGTCGACGTAACGCGCAGTCGCGTCGTAGGCACGGAGCATGGGG 5161 Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTA 63482 | |||||||| || ||| ||||| || || || || || ||||||| || || Sbjct 5160 ACGATACCGTTGGAGTAACCGTTGGTTCCCGAAATGTACGAGCCCTTGGCACGGATGTTG 5101 Query 63483 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63542 || ||||| || || || || | |||||||| ||||| || | ||| Sbjct 5100 TGGATGTGGAGACCGATACCTCCGGCAGTCTTAGAGATCTGCGCGCAGGTCTTGAGGGTG 5041 Query 63543 TCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63602 || |||||||| || || || || ||||| | || || || |||||| || Sbjct 5040 TCGTAGATACCGTCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCAAGAAGACATCTGC 4981 Query 63603 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63662 | ||| || || || || | |||||| |||||||| || || | || || Sbjct 4980 GCATTGGGAGTGCCAGCGTTGAAGAGGGTAGGCGAAGCGTGGGTGAAATAGCGCTCCGAC 4921 Query 63663 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGAC 63721 | || ||||| ||||| | | || || | || | || || || || ||||| Sbjct 4920 ATGAGGTTGTAGGTCTCGAGGACGCGCTCGATGTTGTCACCG-TGGATACCAACAGCGAC 4862 Query 63722 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 63781 |||||| | ||||||||| || | ||| |||||||| ||| || || | ||| || Sbjct 4861 ACGCATGATCATGTGCTGGGGACGCTCAGCGATCTTGCCGTTGATGCGCAGGAGGTACGA 4802 Query 63782 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63841 |||| ||| || || ||||| |||||||| | |||||| || ||||| ||||| | Sbjct 4801 GCGCTCCAGAGTCTTGAAGCCAAAGTAGTTGTAGGCAAAGTCGCGGTCGTAGATAATGGC 4742 Query 63842 CGAGTTGAGTTTATCCTT 63859 ||||| ||| | |||||| Sbjct 4741 CGAGTCGAGCTCATCCTT 4724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944443458640