Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq165 129 7e-25 seq39 120 4e-22 >seq165 Length=23858 Score = 129 bits (142), Expect = 7e-25 Identities = 555/874 (64%), Gaps = 10/874 (1%) Strand=Plus/Minus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || || || || || | || ||||| | | ||| || ||||| | || || || ||| Sbjct 5418 AGGCCGGGGCACTCGGCGGGGCACATGAGTGTCCAGTCACCGTCCTGCTCGACACGCTTC 5359 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || ||||| || || ||||| ||||| || || || | || | ||||| || Sbjct 5358 ATGAAGAGGTCGGGGATCCAGAGAGCGTAGAAGAGGTCACGGGCACGGACCTCCTCCTTG 5299 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| | || || ||||| | | | || | ||||| || || | || Sbjct 5298 CCGTGGTTCTTCCTCAGGTCAAGGAAGTCAAAGACGTCGGCGTGCCATGGCTCGAGATAG 5239 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | || || || ||||| || ||||| || | ||| | || || | Sbjct 5238 ATGGCAAACGCACCGGGGCGCTTGTTACCACCCTGGTCGACGTAACGCGCAGTCGCGTCG 5179 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 || | | | ||| || | ||||| ||||| ||| ||||| || || || || Sbjct 5178 TAGGCACGGAGCATGGGGACGATACCGTTGGAGTAACCGTTGGTTCCCGAAATGTACGAG 5119 Query 63320 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379 || ||||||| || || || ||||| || || || || | |||||||| Sbjct 5118 CCCTTGGCACGGATGTTGTGGATGTGGAGACCGATACCTCCGGCAGTCTTAGAGATCTGC 5059 Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439 ||||| || | || || ||||| || || || || ||| ||||| | || Sbjct 5058 GCGCAGGTCTTGAGGGTGTCGTAGATACCGTCAATCGAGTCGTCCTTCATGGCGACGAGG 4999 Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499 || || |||||| || | ||| || || || || | |||||| |||||||| Sbjct 4998 AAGCAAGAAGACATCTGCGCATTGGGAGTGCCAGCGTTGAAGAGGGTAGGCGAAGCGTGG 4939 Query 63500 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTG 63558 || || | || || | || ||||| ||||| | | || || | || | Sbjct 4938 GTGAAATAGCGCTCCGACATGAGGTTGTAGGTCTCGAGGACGCGCTCGATGTTGTCACCG 4879 Query 63559 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63618 || || || || ||||||||||| | ||||||||| || | ||| |||||||| ||| Sbjct 4878 -TGGATACCAACAGCGACACGCATGATCATGTGCTGGGGACGCTCAGCGATCTTGCCGTT 4820 Query 63619 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63678 || || | ||| || |||| ||| || || ||||| |||||||| | |||||| Sbjct 4819 GATGCGCAGGAGGTACGAGCGCTCCAGAGTCTTGAAGCCAAAGTAGTTGTAGGCAAAGTC 4760 Query 63679 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 63738 || ||||| ||||| |||||| ||| | |||||| | || | || || || || Sbjct 4759 GCGGTCGTAGATAATGGCCGAGTCGAGCTCATCCTTGTGCTTCATGACAACCTC----GT 4704 Query 63739 AATACT----TGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATA 63794 | || || || ||||| | | || || | || || ||||| ||||| | | Sbjct 4703 ACACCTCGTCCGAGATCATAGGGGCACGCTTTCCTGTCTTGGGGTTGACCCAGTTGTACA 4644 Query 63795 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTA 63854 || | | || | || | || || || || ||||| || || || | ||| | Sbjct 4643 GGTCGGCGACGACCTGCGAGAAGACCTTCTTGGTCTCCTTGTGGAGGTTGGAGATGGCAA 4584 Query 63855 TTCTAGCGGCTAGAATGGCATAATCCGGATGTTG 63888 | | |||||| ||||| ||||||||||| || || Sbjct 4583 TACGAGCGGCGAGAATAGCATAATCCGGGTGCTG 4550 >seq39 Length=45975 Score = 120 bits (132), Expect = 4e-22 Identities = 179/252 (71%), Gaps = 3/252 (1%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| || |||||||| | || | |||||||| || ||||| Sbjct 1363 CAGGCAAAGTCGGTGTGGAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGG 1422 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| ||||| ||||| || ||||| || || || ||||| || ||||| ||||| Sbjct 1423 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAG 1482 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCT--GTCATGT 32837 || || || || || |||||||||||||| | ||| || | || | | ||| Sbjct 1483 ATGCCCTCGACGGCTGCAAAGGCAATAAGGCGCTCGGCAAAGGACGACTTTTCGTCCGTG 1542 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 ||||| | ||||| ||||||||||| || | || || || ||||| || || | Sbjct 1543 ATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATCGCCTGG 1602 Query 32898 AAGAGATAGTTT 32909 ||||| |||||| Sbjct 1603 AAGAGGTAGTTT 1614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629196178400