Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq33 105 6e-18 >seq33 Length=47741 Score = 105 bits (116), Expect = 6e-18 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | ||||| || |||| || |||| || |||||||| Sbjct 12366 ATGCAGATCTTCGTCAAGACTCTTACCGGGAAGACCATTACTCTCGAGGTCGAGTCGTCC 12425 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| || || ||| || ||| ||||| || || || || || |||| Sbjct 12426 GACACTATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACC 12483 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | ||||| ||||| || || | || |||| || ||| | ||| |||| Sbjct 12484 AACAGCGTCTCATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACTCTTTCCGACTACA 12543 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 | || || || || ||||| || || | || || | || | ||||||| Sbjct 12544 ACATCCAGAAGGAGTCCACCCTCCACCTCGTCCTGCGTCTCCGTGGAGGAA 12594 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| |||||| ||||||| || | || || | |||||||||||||| Sbjct 12593 AATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACAATTACTTTGGAAGTGGAGTCGTC 12652 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| ||| ||| ||||| || || || || || ||||| Sbjct 12653 CGACACCATTGACAACGTAAAGTCAAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCA 12712 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || |||||||| || || | || || | ||||| | ||| ||||| Sbjct 12713 GCAGCGTCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 12772 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || || || || || || Sbjct 12773 CATCCAGAAGGAGTCTACCCTCCA 12796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326130460510