Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq33 132 4e-26 seq339 104 2e-17 >seq33 Length=47741 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | ||||| || || | ||| | |||||||| | || Sbjct 12594 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACAATTACTTTGGAAGTGGAGTCGTCC 12653 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||| || || |||||||||||||| || ||||| || Sbjct 12654 GACACCATTGACAACGTAAAGTCAAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAG 12713 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || |||||||| || ||| | ||||| ||||||| ||||||| |||||| Sbjct 12714 CAGCGTCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 12773 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || ||| | || | ||| | || | ||||| ||| Sbjct 12774 ATCCAGAAGGAGTCTACCCTCCACCTTGTTCTTCGCCTCCGCGGTGGT 12821 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || | ||||| || || || | || Sbjct 12366 ATGCAGATCTTCGTCAAGACTCTTACCGGGAAGACCATTACTCTCGAGGTCGAGTCGTCC 12425 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || |||||||||||||| || ||||| ||| Sbjct 12426 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAA 12485 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | |||||| ||| || | ||||| |||||| Sbjct 12486 CAGCGTCTCATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACTCTTTCCGACTACAAC 12545 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||||| | || | || |||| | || ||||| Sbjct 12546 ATCCAGAAGGAGTCCACCCTCCACCTCGTCCTGCGTCTCCGTGGAGG 12592 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || ||| |||| || ||||| || || | Sbjct 12822 ATGCAGATCTTCGTCAAGACCTTGACCGGGAAGACGATCACCCTGGAAGTCGAGTCCTCT 12881 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || |||||||||||||| || ||||| || Sbjct 12882 GACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 12941 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | || || |||||| || ||| |||||| Sbjct 12942 CAGCGCCTCATTTTCGCAGGCAAGCAGCTCGAAGACGGCCGCACGCTCAGCGACTACAAC 13001 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 13002 ATCCAGAAGGAGTCGACC 13019 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || | | Sbjct 11910 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGTCTTCG 11969 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| || || ||||| || Sbjct 11970 GACACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 12029 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| ||||| ||||| ||| | |||||| ||||||| | ||||| |||||| Sbjct 12030 CAGCGCCTTATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAAC 12089 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 12090 ATCCAGAAGGAGTCGAC 12106 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || || || | ||||| || || |||| || || || || || Sbjct 11633 AAGATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCC 11692 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| | |||| || || || ||||||||||| || || ||||| Sbjct 11693 TCGGACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 11752 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || || || || |||||||| ||| | ||||| ||||||| ||||||| ||| Sbjct 11753 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 11812 Query 22396 A 22396 | Sbjct 11813 A 11813 >seq339 Length=62760 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279 |||| ||||| || || || | || || || || |||| ||||| || || || | | Sbjct 1409 TGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGG 1468 Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339 | ||| | ||| | |||| || || || ||||||||||| || || ||||| || | Sbjct 1469 ACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGC 1528 Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399 | ||||| || || |||||||| ||| | ||||| ||||||| | || || ||||||| Sbjct 1529 AGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACA 1588 Query 22400 TTCAAAAAGAATCCACC 22416 | || || || || ||| Sbjct 1589 TCCAGAAGGAGTCGACC 1605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726189136010