Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq33 141 2e-28 seq339 102 2e-16 >seq33 Length=47741 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| || || || | || || || ||||| || ||||||| | Sbjct 12820 CCACCGCGGAGGCGAAGAACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 12761 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || ||||| || |||||||||||||| || ||| Sbjct 12760 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGCGGG 12701 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| ||| || ||| Sbjct 12700 ATACCCTCCTTGTCCTGGATCTTTGACTTTACGTTGTCAATGGTGTCGGACGACTCCACT 12641 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | || || ||||| ||||||||||||||||| || ||||||||| Sbjct 12640 TCCAAAGTAATTGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCATT 12593 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || ||||| | || ||||| || | ||| || || ||||| || ||||||| Sbjct 12593 TCCTCCACGGAGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 12534 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || || || | || ||||| ||||| || ||||||||||| || Sbjct 12533 AAGAGTACGGCCATCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGGGG 12474 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| || || || |||||||| || | || || || || |||| ||| ||| || || Sbjct 12473 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCGAC 12414 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||||||||| |||||||||||||| |||||||| Sbjct 12413 CTCGAGAGTAATGGTCTTCCCGGTAAGAGTCTTGACGAAGATCTGCAT 12366 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| ||||||||| |||||||| | || || |||||||| Sbjct 13012 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCGAGCTGCTTGCCTGCGAAA 12953 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || ||||| || || || |||||||| || | || || || Sbjct 12952 ATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTG 12893 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || ||||| || ||||||||||||||||||| ||||||||| Sbjct 12892 TCAATGGTGTCAGAGGACTCGACTTCCAGGGTGATCGTCTTCCCGGTCAAGGTCTTGACG 12833 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 12832 AAGATCTGCAT 12822 >seq339 Length=62760 Score = 102 bits (112), Expect = 2e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | || || || ||||| || ||||| | Sbjct 1634 CCACCACGCAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1575 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| || ||| Sbjct 1574 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 1515 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | || || || || Sbjct 1514 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACC 1455 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA 288472 || || ||||| ||||| || || || ||||||||||| ||||||| Sbjct 1454 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCA 1409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179649049530012