Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq33 122 9e-23 seq339 98.7 1e-15 >seq33 Length=47741 Score = 122 bits (134), Expect = 9e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | ||||| || || || |||||||| || || ||||| ||||| Sbjct 13033 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCT 12974 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || ||||||| ||||||||||||||||| || || || || || Sbjct 12973 TCGAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 12914 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || ||| || || ||||| | || | ||| Sbjct 12913 TGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCGACTTCCAGGGTGATCGTC 12854 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || |||||||| || || ||||| || ||||| Sbjct 12853 TTCCCGGTCAAGGTCTTGACGAAGATCTGCAT 12822 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||| || || || | || || || || || |||||||| || | Sbjct 12821 ACCACCGCGGAGGCGAAGAACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 12762 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || |||||||| |||||| | || || |||||||||||||| || Sbjct 12761 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGCGG 12702 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || ||| |||||| || | || || | ||||| Sbjct 12701 GATACCCTCCTTGTCCTGGATCTTTGACTTTACGTTGTCAATGGTGTCGGACGACTCCAC 12642 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| | ||| | ||||||||||||| ||| || || || || |||||| Sbjct 12641 TTCCAAAGTAATTGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCATT 12593 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 64266 TGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCT 64325 |||| || | || |||||| |||| || |||||||||||||| | ||||| ||||||| Sbjct 11813 TGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT 11754 Query 64326 GGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCAC 64385 ||||||| || || || || || || || || || ||| || || | || || Sbjct 11753 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCCG 11694 Query 64386 CGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTT 64445 || || || || | || | |||||||||||| | || || ||||| || ||||| | Sbjct 11693 AGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATCT 11634 Query 64446 T 64446 | Sbjct 11633 T 11633 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || |||| ||||| || || || |||||||| || | Sbjct 12137 ACCACCACGCAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 12078 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || || ||||||||||| ||| | || || |||||||||||||| || Sbjct 12077 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGGGGG 12018 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 || || || || || || || || Sbjct 12017 GATGCCCTCCTTGTCCTGGATCTT 11994 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||||| | || | ||||| || || || |||||||| || | Sbjct 12365 ACCACCGCGCAGACGGAGCACCAAGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGA 12306 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| || ||||||||||| ||| | || | ||||||||||| || || Sbjct 12305 CAGCGTACGTCCGTCCTCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGG 12246 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||| || || || || || || ||| || || | || || | || || Sbjct 12245 GATTCCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCGGAAGACTCAAC 12186 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || |||||||| || ||||| Sbjct 12185 CTCGAGCGTAATGGTCTTGCCCGTGAGGGTCTTTACGAAGATCTGCAT 12138 >seq339 Length=62760 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || || | ||||| || || || |||||||| || | Sbjct 1635 ACCACCACGCAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 1576 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || |||||||||||||| | ||||| |||||||||||||| || Sbjct 1575 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 1516 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || || || || Sbjct 1515 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTCGAC 1456 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCA 64442 || | || | ||||||||| || | || || |||||||| |||| Sbjct 1455 CTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCA 1409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642589071760