Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq339 134 3e-26 seq33 129 1e-24 >seq339 Length=62760 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 1619 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 1560 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||||||||| || || || || ||| Sbjct 1559 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 1500 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 1499 TGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTC 1440 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || ||||| || Sbjct 1439 TTGCCCGTGAGGGTCTTGACGAAAATCTG 1411 >seq33 Length=47741 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| || |||||||| |||| ||||||||| | | || | || || Sbjct 12805 AGAACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 12746 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||| ||||| |||||||||||||| || || || || ||| Sbjct 12745 TCGAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCC 12686 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| ||| || | |||||| | | || || ||||| || || ||| Sbjct 12685 TGGATCTTTGACTTTACGTTGTCAATGGTGTCGGACGACTCCACTTCCAAAGTAATTGTC 12626 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || ||||| || || Sbjct 12625 TTGCCGGTCAGAGTCTTGACAAAGATCTG 12597 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| |||||||||||||| |||| ||||||||| | || || | ||||| Sbjct 12121 AGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCC 12062 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| || ||||||||||| || || || || ||| Sbjct 12061 TCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 12002 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 12001 TGGATCTTGCTCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTC 11942 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| || || Sbjct 11941 TTGCCAGTGAGGGTCTTGACAAAGATCTG 11913 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| |||||||| || |||||||| |||| ||||||||| | | ||| Sbjct 12586 CGGAGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTA 12527 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||||||||||||||| ||||||||||| ||||| || || || Sbjct 12526 CGGCCATCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGGGGGATACCC 12467 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| ||||| | | || || || | Sbjct 12466 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCGACCTCGAGA 12407 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| || || || || || Sbjct 12406 GTAATGGTCTTCCCGGTAAGAGTCTTGACGAAGATCTG 12369 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| | |||||||||||| |||| ||||||||| | || || | ||| || Sbjct 12349 AGCACCAAGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGTCCGTCC 12290 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| | ||||||||||| || ||||| || ||| Sbjct 12289 TCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 12230 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||| | | || || || | ||| || ||| Sbjct 12229 TGAATCTTGCTCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGCGTAATGGTC 12170 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || || || Sbjct 12169 TTGCCCGTGAGGGTCTTTACGAAGATCTG 12141 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| ||||||||||| |||| ||||||||| | || | || ||| Sbjct 13033 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCT 12974 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| ||||| ||||||||||| ||| || || || ||| Sbjct 12973 TCGAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 12914 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | |||||| | | || || |||| ||||||||| Sbjct 12913 TGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCGACTTCCAGGGTGATCGTC 12854 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || || || || || Sbjct 12853 TTCCCGGTCAAGGTCTTGACGAAGATCTG 12825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178916252853718