Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq39 302 4e-77 seq339 138 1e-27 seq33 138 1e-27 >seq39 Length=45975 Score = 302 bits (334), Expect = 4e-77 Identities = 571/827 (69%), Gaps = 25/827 (3%) Strand=Plus/Plus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| ||||| || | || |||| | || || | | |||||| || || ||||| | Sbjct 1095 CTCGAAAAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATAAAGTCGAATGGGTTTGT 1154 Query 132687 TGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | ||| || ||| | |||||| | ||||||| || | |||||| || ||||| Sbjct 1155 AGAGTTCCAGATCTTTTCGTTGCCGAGCG---CGACGAGGAGACGGTCGGCGACAAACTC 1211 Query 132744 GATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGG 132802 |||||| || ||||| | || || | | | || | || || || || || |||| Sbjct 1212 GATGTACTGGCACATGAGCTTGGCGTTCATG-CCGATGAGCGAGACGGGGAGGGCGTCGG 1270 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT-TTCCCTAACGCGCGCCGCG 132861 |||| || |||||| || ||| || || ||| || || | | || | ||| | Sbjct 1271 TGAGGAACTCTTGCTCAATCTTGACGGCCTCCTTGATAATCTTGGCGATCGTGT-CCGGG 1329 Query 132862 CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCG 132921 || || || | ||| ||| | | ||| ||||||||| || | ||||||| Sbjct 1330 TGTGGGCGGCGCTGGAGGTGCGAGAAGAGGAGGCAGGCAAAGTCGGTGTGGAGGCCCTCG 1389 Query 132922 TCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGC 132981 || | || ||||| |||||| ||| || | |||||||||||||||||| || |||||| Sbjct 1390 TCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGC 1449 Query 132982 CAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACC 133041 || || || | ||| || ||| || ||||||| |||||||||||| || || || | Sbjct 1450 CAGAAGATCGAGGCAAACGAGCCAGAGAAGAAGATGCCCTCGACGGCTGCAAAGGCAATA 1509 Query 133042 AGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTT 133101 ||||||||| | || | | | || | | ||||||||| || ||||| |||||||| Sbjct 1510 AGGCGCTCGGCAAAGGACGACTTTTCGTCCGTGATCCAGCGGAGGGCCCAGTCGGCCTTC 1569 Query 133102 TCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCT---CT-TCCGA 133157 | |||| ||| || || || ||||| || | | | | | ||||||| || ||| Sbjct 1570 TTCTTGATGCAGGGGATGGTCTCGATCGCCTGGA--AGAGGTAGTTTCTGCGCTCGCCGT 1627 Query 133158 GGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGC 133217 | || | ||| |||||||||||| ||| ||| | || ||||| | ||||||||| Sbjct 1628 CG--CGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCAGAGTGGATGTTCTCCATCAT 1685 Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGC--ACTTCTTGAGCGAAACGC 133275 ||| || |||||||| || | |||||| | | ||| || || ||| ||| Sbjct 1686 GATCTGGAAGCCGTAGAACGTCTTGGCCTCGGCAA--TGCCGACGTCGCCGCAGAAGCGC 1743 Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335 |||||||| || |||||||| |||||||| ||| ||||||||||| |||||||||| | Sbjct 1744 TCGACCAGGTTCTCGTTGACAATGCCGTCAGAGGCCGCGAAAAAGGCAAGCACGTGCTCG 1803 Query 133336 ATGAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392 || || | ||||||||||||||| | | ||||||||| | ||| | ||| Sbjct 1804 ATAAAGTAGCGCTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGGAGGTCGGGCGCGAGG 1863 Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||||| ||||||| ||||| |||| || || |||||||| Sbjct 1864 TTGATCTCCTCGGCGGTCCAGAACGAGGCCTGCGCCTTCTTGTACAT 1910 >seq339 Length=62760 Score = 138 bits (152), Expect = 1e-27 Identities = 154/203 (76%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 |||| || ||||| || || ||||||||||| ||||||||| | || |||||| || | | Sbjct 1409 TGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGG 1468 Query 38305 ACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | | |||| | || || |||| ||||| ||||| || ||| ||||||| Sbjct 1469 ACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 1527 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| ||||| ||||| || |||| |||||||| ||||||||| Sbjct 1528 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 1587 Query 38424 ATCCAAAAGGAAGCGACGCTGCA 38446 ||||| ||||| |||| || || Sbjct 1588 ATCCAGAAGGAGTCGACCCTCCA 1610 >seq33 Length=47741 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || || |||||| | || |||||| || | Sbjct 12822 ATGCAGATCTTCGTCAAGACCTTGACCGGGAAGACGATCACCCTGGAAGTCGAGTCCTCT 12881 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || || ||||||| Sbjct 12882 GACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 12941 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| ||| ||||| ||||| || |||| ||||| |||| |||||||||| Sbjct 12942 CAGCGCCTCATTTTCGCAGGCAAGCAGCTCGAAGACGGCCGCACGCTCAGCGACTACAAC 13001 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||| ||||| |||| || || ||||||| ||| | | ||||||| Sbjct 13002 ATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGTCTCCGTGGCGGCC 13050 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || |||||||| || ||||||||||| ||||| || |||| || ||| | || Sbjct 12138 ATGCAGATCTTCGTAAAGACCCTCACGGGCAAGACCATTACGCTCGAGGTTGAGTCTTCC 12197 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || || | ||||| |||||||| ||| | ||||| Sbjct 12198 GACA-CGATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCTGACCA 12256 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | |||||||| ||||| || |||| || || || ||||||||| Sbjct 12257 GCAGCGCTTGATCTTTGCGGGCAAGCAGCTCGAGGACGGACGTACGCTGTCCGACTACAA 12316 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||| |||| |||||||| ||| || | || || Sbjct 12317 CATCCAGAAGGAGTCGACTTTGCACTTGGTGCTCCGTCTGCGCGGTGG 12364 Score = 132 bits (146), Expect = 5e-26 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| ||||||||| |||| |||||| | | Sbjct 11910 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGTCTTCG 11969 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || |||| ||||| ||||| || ||| |||||| Sbjct 11970 GACACCATTGACAACG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACC 12027 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | |||||||| ||||| || || | |||||||| |||||||| Sbjct 12028 AGCAGCGCCTTATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACA 12087 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| |||| || || | || || ||| || | || || Sbjct 12088 ACATCCAGAAGGAGTCGACTCTTCACCTCGTCCTCCGTCTGCGTGGTGG 12136 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || ||||| || |||| |||||| | || Sbjct 12366 ATGCAGATCTTCGTCAAGACTCTTACCGGGAAGACCATTACTCTCGAGGTCGAGTCGTCC 12425 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| ||||| ||||| || ||| |||||||| Sbjct 12426 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAA 12485 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| ||| || || ||||| || || | || || || |||||||||| Sbjct 12486 CAGCGTCTCATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACTCTTTCCGACTACAAC 12545 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || || | || |||||| Sbjct 12546 ATCCAGAAGGAGTCCACCCTCCACCTCGTCCTGCGT 12581 Score = 105 bits (116), Expect = 7e-18 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || ||||| || || || | || || ||| | | Sbjct 12593 AATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACAATTACTTTGGAAGTGGAGTCGTC 12652 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 ||||| | | | |||| ||||| ||| |||| ||||| ||||| || || ||||| Sbjct 12653 CGACACCATTGACAACG--TAAAGTCAAAGATCCAGGACAAGGAGGGTATCCCGCCCGAC 12710 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | || || || ||||| || |||| ||||||||| ||||||| Sbjct 12711 CAGCAGCGTCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 12770 Query 38421 AACATCCAAAAGGA 38434 |||||||| ||||| Sbjct 12771 AACATCCAGAAGGA 12784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170586735360