Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq33 104 2e-17 seq339 100 2e-16 >seq33 Length=47741 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| | || |||| || ||||| || || ||||| Sbjct 12100 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAG 12041 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 12040 ATAAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG 11981 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| ||| ||||| || || ||||| ||||| ||| Sbjct 11980 TCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACA 11921 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 11920 AAGATCTGCATA 11909 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| || || | ||| | || || Sbjct 12346 ACCAAGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGTCCGTCCTCG 12287 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || | || |||||||| | || | ||||||||||| | Sbjct 12286 AGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGA 12227 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | |||||| |||| || ||||| || Sbjct 12226 ATCTTGCTCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGCGTAATGGTCTTG 12167 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||||||| ||||| || |||||||||||| Sbjct 12166 CCCGTGAGGGTCTTTACGAAGATCTGCATA 12137 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| | || | || || ||||| ||||||||||| Sbjct 12784 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAG 12725 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| || ||| Sbjct 12724 ATCAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTTGACTTTACGTTG 12665 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | || || || || || || |||||||| ||| Sbjct 12664 TCAATGGTGTCGGACGACTCCACTTCCAAAGTAATTGTCTTGCCGGTCAGAGTCTTGACA 12605 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 12604 AAGATCTGCAT 12594 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||||| | || |||| || ||||| |||||||| || Sbjct 12556 TCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCGAGCTGCTTTCCGGCGAAA 12497 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | ||||||||||| ||||| ||||| || Sbjct 12496 ATGAGACGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGAC--AT 12439 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | ||| || |||| || ||||| || || || |||||||| Sbjct 12438 --TGTCGATAGTGTCGGACGACTCGACCTCGAGAGTAATGGTCTTCCCGGTAAGAGTCTT 12381 Query 34967 CACAAAGATCTGCATA 34982 || |||||||||||| Sbjct 12380 GACGAAGATCTGCATA 12365 Score = 89.7 bits (98), Expect = 3e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865 ||||| || ||| | || | || || ||||| || ||||| || || || || |||||| Sbjct 11811 TAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG 11752 Query 34866 TCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCG 34925 || | || | ||||||||||| ||||| |||||| | || | || | Sbjct 11751 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCCGAG 11692 Query 34926 GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985 | ||| || |||| ||| ||||| || || ||||| |||||||| ||||||||||| || Sbjct 11691 GACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATCTTG 11632 Query 34986 GT 34987 || Sbjct 11631 GT 11630 >seq339 Length=62760 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||||||| | || | || || ||||| || ||||| || Sbjct 1598 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 1539 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 1538 ATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 1479 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || || | ||| ||||| || |||||||| ||||| || Sbjct 1478 TCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 1419 Query 34971 AAGATCTGCA 34980 || ||||||| Sbjct 1418 AAAATCTGCA 1409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632199408912