Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq165 163 3e-35 seq39 127 2e-24 >seq165 Length=23858 Score = 163 bits (180), Expect = 3e-35 Identities = 408/612 (67%), Gaps = 17/612 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| ||||| | || |||||||| || |||| || ||| Sbjct 4841 CCCCAGCACATGATCATGCGTGTCGCTGTTGGTATCCACGGTGACAACATCGAGCGCGTC 4900 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || ||||| | | ||| |||| ||||| | || |||||||| Sbjct 4901 CTCGAGACCTACAACCTCATGTCGGAGCGCTAT-TTCACCCACGCTTCGCCTACCCTCTT 4959 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| ||||| || || | |||||||||| ||||||||| |||||| ||||| || Sbjct 4960 CAACGCTGGCACTCCCAATGCGCAGATGTCTTCTTGCTTCCTCGTCGCCATGAAGGACGA 5019 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| || |||||||||| | || || | | || ||||| ||||| ||| || || Sbjct 5020 CTCGATTGACGGTATCTACGACACCCTCAAGACCTGCGCGCAGATCTCTAAGACTGCCGG 5079 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGGGGACA 75508 ||||| || | |||||||| | | | |||| | ||||| ||| ||| || Sbjct 5080 AGGTATCGGTCTCCACATCCACAACATCCGTGCCA--AGGGCTCGTACATTTCGGGAACC 5137 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || ||| | || | ||||| | || ||||| || | | |||| || ||||| || Sbjct 5138 AACGGTTACTCCAACGGTATCGTCCCCATGCTCCGTGCCTACGACGCGACTGCGCGTTAC 5197 Query 75569 GTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | || ||| || |||| || | | || |||| | || |||||| Sbjct 5198 GTCGACCA---GGGTGGTAACAAGCGCCCCGGTGCGTTTGCCATCTATCTCGAGCCATGG 5254 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || ||||| || | || |||||||| | | ||||| || | || |||| || | Sbjct 5255 CACGCCGACGTCTTTGACTTCCTTGACCTGAGGAAGAACCACGGCAAGGAGGAGG-TCCG 5313 Query 75683 TG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 || | || ||||| | | || ||||| || ||||| ||||||||||| || ||| | Sbjct 5314 TGCCCGTGACCTCTTCTACGCTCTCTGGATCCCCGACCTCTTCATGAAGCGTGTCGAGCA 5373 Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 || ||| | ||| | || | || || | | || || || ||| |||||| Sbjct 5374 GGACGGTGACTGGACACTCATGTGCCCCGCCGAGTGCCCCGGCCTCGCCGACGTCCACTC 5433 Query 75802 TGAGGAGTTTGA 75813 |||||||||||| Sbjct 5434 TGAGGAGTTTGA 5445 >seq39 Length=45975 Score = 127 bits (140), Expect = 2e-24 Identities = 299/445 (67%), Gaps = 10/445 (2%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||| |||||||||||| |||| ||||| || ||||| ||||||||||| || || Sbjct 1526 TCCTTTGCCGAGCGCCTTATTGCCTTTGCAGCCGTCGAGGGCATCTTCTTCTCTGGCTCG 1467 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 || | | || | ||| | |||||||| || |||||||| ||||| |||||| || Sbjct 1466 TTTGCCTCGATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAAC 1407 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG-AC 65246 || || || || || || ||||| |||||| || |||||| |||||| | || Sbjct 1406 GAGCTCATCTCGCGCGACGAGGGCCTCCACACCGACTTTGCCTGCCTCCTCTTCTCGCAC 1347 Query 65247 TT--TGCGTAATAGACCCACTACC-GAAACTATCCACGCCATCGTGAAAGAGGCGGTTGA 65303 | ||| ||||| || || || ||| | || | || ||||| || | Sbjct 1346 CTCCAGCG----CCGCCCACACCCGGACACGATCGCCAAGATTATCAAGGAGGCCGTCAA 1291 Query 65304 GATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGA 65363 ||||||| ||| |||| || ||||| ||||| |||||||| |||||| | | Sbjct 1290 GATTGAGCAAGAGTTCCTCACCGACGCCCTCCCCGTCTCGCTCATCGGCATGAACGCCAA 1231 Query 65364 GAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGC- 65422 | |||| | ||||||| |||| ||| | || ||||||||| | | | || | Sbjct 1230 GCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGTCTCCTC-GTCGCGCTCGGCAACG 1172 Query 65423 CACCCATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGA 65482 | || |||||| | | || ||||| ||||||||||| | || || | || | Sbjct 1171 AAAAGATCTGGAACTCTACAAACCCATTCGACTTTATGGAGATGATCTCGCTCCAGGGCA 1112 Query 65483 AGACCAACTTCTTTGAGAAGCGAGT 65507 || ||||||| || ||| ||| || Sbjct 1111 AGGCCAACTTTTTCGAGTCGCGCGT 1087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566960179520