Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq116 111 5e-19 seq299 104 7e-17 >seq116 Length=30814 Score = 111 bits (122), Expect = 5e-19 Identities = 183/264 (69%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||| ||||| | | | | ||| |||||| ||||| | || || |||||||||||||| Sbjct 7715 ATCGTAACCGACCTTCAGGTCCTCCATAGCCTTGACCAGTCGCCGTTGAATATAACCAGT 7774 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | | || || ||||| || || || ||||| ||||||||||||| || |||||||| Sbjct 7775 TTCCGCGGTCTTGACAGCAGTGTCGATGAGACCCTCACGACCACCCATGGCGTGGAAGAA 7834 Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732 | ||||| || || || | | ||||| |||| || ||||| |||| ||| || Sbjct 7835 GAACTCTTGGGGAGTGAGACCACGCAGGTAGGAGTTCTCGACAAAACCGCGCGACTCCGG 7894 Query 302733 CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACG 302792 || |||| |||| |||| |||| ||| | | | ||||| |||| || || Sbjct 7895 TCCATAGTCGTCCTTGCCGTAGTGCGGCAAGGTGCGATGCCTGAAGCCGAATGGAATTCG 7954 Query 302793 CTTTCCATCAACGTTCTGCTGTCC 302816 ||| || || || | ||||| || Sbjct 7955 CTTGCCCTCTACCATTTGCTGGCC 7978 >seq299 Length=82270 Score = 104 bits (114), Expect = 7e-17 Identities = 383/592 (65%), Gaps = 16/592 (3%) Strand=Plus/Minus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463 || ||||||||||||| || || | || | | | | ||||| || | ||| || | | Sbjct 80873 GCCATAAGACCACACTGATCGCAGATGTGCAGACGGAACGCATCCGACGAGTCGTACATC 80814 Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523 | ||||| ||| | || |||||| || |||||||| || |||||||| || ||| Sbjct 80813 CTCTCCTTGAGGAATCCAGCAATACCGTGCGAGATCATACAGTCGCGCTCCATCTCTCCG 80754 Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATA 251583 ||||| |||||||| || || | | ||||||| |||| || ||||| || | || Sbjct 80753 AAACGCAGACCACCGTCACGCGAACGACCCTCGACAGGTTGGCGAGTAAGGATCTGCAAG 80694 Query 251584 GGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAAT 251643 ||||| | || || ||| || | ||||| |||||||||||||||||| | Sbjct 80693 GGACCACGCGCACGCGCGTGGATCTTGTCGTCCACCATGTGCTTGAGACGCTGGTAGTAC 80634 Query 251644 GCGGGACCGATGAAGA--TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAA 251701 | || || | | | | || || || |||| || || || ||| ||||| | Sbjct 80633 GTCGGGCCAAAGTACACCTGGGCG-CGGAGCTTGC-GACCCGTGTGACCGTGGTACATGA 80576 Query 251702 CTTCGTTTCCATTAGATTCATAACCAAGTT---TCTGTAGCTCTGAAGCAATATCACCAA 251758 | ||| || |||| ||| ||| ||| || | |||| || || | | | Sbjct 80575 CCTCGAGGCCGCGTGATTGATATCCATGTTCTCTCAGGAGCTTGGACACAGACT---CGA 80519 Query 251759 TCTTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGC 251818 | ||| | | ||||| || ||||||| | |||| | || || ||| Sbjct 80518 CCGTGAGCTCGGTAAAAGGCGTCGCGTCTCCCTCCCGACCGTTCATCGTCGCCAGCTTGG 80459 Query 251819 CTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGA 251878 | || ||| || || ||||||||||||| ||||| || || || |||| Sbjct 80458 AGAGTAGACACTCGACCAAGTGTCCGATAGTCATACGCGACGGAATGGCGTGCGGGTTGA 80399 Query 251879 TGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-A 251935 |||||||||| || | || || || ||||| ||||| ||| |||| | ||| Sbjct 80398 TGATGATGTCCGGCACAATGCCCTCGGCCGTGAACGGCATGTCC---TCCTGGCGATACG 80342 Query 251936 TGTTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | | || ||||| ||||| ||||||||||| || ||||| || ||||| Sbjct 80341 TAATACCGATAGTACCCTTCTGTCCGTGACGCGAGGCAAACTTGTCTCCAAT 80290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810924387298