Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq33 102 5e-17 >seq33 Length=47741 Score = 102 bits (112), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| |||||||| ||||| |||| || | || ||||||||||| Sbjct 12785 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAA 12726 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| ||||||||| || |||| | ||| || ||||| || || || | || | Sbjct 12725 GATCAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTT-TGACTTTACGT 12667 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||||||| || ||||| || | || || || || || || | || || | Sbjct 12666 TGTCAATGGTGTCGGACGACTCCACTTCCAAAGTAATTGTCTTGCCGGTCAGAGTCTTGA 12607 Query 33737 CAAAGATCTGCAT 33749 ||||||||||||| Sbjct 12606 CAAAGATCTGCAT 12594 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | |||||| || | ||| ||| || || |||||||| ||||| Sbjct 12365 ACCACCGCGCAGACGGAGCACCAAGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGA 12306 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| |||| || | || || || ||||| ||||| |||||||| || | || Sbjct 12305 CAGCGTACGTCCGTCCTCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGG 12246 Query 33642 CACACCTTCTTTGTCGGCAATTTT-CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | || || ||||| ||| || || || || | ||| | |||||| || || Sbjct 12245 GATTCCCTCCTTGTCCTGAATCTTGCTCTTG--ACGTTGTCGATCGTGTCGGAAGACTCA 12188 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||| || || || || || | || ||||| |||||||||||| Sbjct 12187 ACCTCGAGCGTAATGGTCTTGCCCGTGAGGGTCTTTACGAAGATCTGCATA 12137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702581847680