Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq39 109 5e-19 >seq39 Length=45975 Score = 109 bits (120), Expect = 5e-19 Identities = 284/430 (66%), Gaps = 5/430 (1%) Strand=Plus/Minus Query 46824 GCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCC 46883 ||||||||| | | || || || ||||| ||| | || || || ||| |||||| Sbjct 1520 GCCGAGCGCCTTATTGCCTTTGCAGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTTTGCC 1461 Query 46884 GCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTG 46943 | || || | | || | ||| | ||||| ||||| || ||| |||||| | Sbjct 1460 TCGATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTC 1401 Query 46944 ATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAGACGCGCGTG 47003 |||||||||||||| || || ||||| |||||||| || ||| | | ||| | | Sbjct 1400 ATCTCGCGCGACGAGGGCCTCCACACCGACTTTGCCTGCCTCCTCTTCT---CGCACCTC 1344 Query 47004 AATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAA 47063 | | || ||||||||||| | || | | |||||| || | || || Sbjct 1343 CAGCGCCGCCCACACCCGGACACGATCGCCAAGATTATCAAGGAGGCCGTCAAGATTGAG 1284 Query 47064 AAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATG 47123 | ||||| | || | || || |||||| | | | ||||||||||| || ||| Sbjct 1283 CAAGAGTTCCTCACCGACGCCCTCCCCGTCTCGCTCATCGGCATGAACGCCAAGCTCATG 1224 Query 47124 TGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATAT 47183 ||| | || || |||||||| || || ||||| | || |||||| |||| ||| || Sbjct 1223 TGCCAGTACATCGAGTTTGTCGCCGACCGTCTCCTCGTCGCGCTCGG-CAACGAAAAGAT 1165 Query 47184 -TTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAA 47242 | || || || || || || |||||| | | || |||||| ||||||| |||| Sbjct 1164 CTGGAACTCTACAAACCCATTCGACTTTATGGAGATGATCTCGCTCCAGGGCAAGGCCAA 1105 Query 47243 TTTTTTCGAG 47252 ||||||||| Sbjct 1104 CTTTTTCGAG 1095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609090995440