Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq39 253 3e-61 seq165 181 2e-39 seq236 136 6e-26 seq216 113 6e-19 >seq39 Length=45975 Score = 253 bits (280), Expect = 3e-61 Identities = 392/545 (72%), Gaps = 21/545 (4%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||||| || ||||||||||||||| || ||| Sbjct 1920 GATCTGGCAAATGTAC-AAGAAGGCGCAGGCCTCGTTCTGGACCGCCGAGGAGATCAACC 1862 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 ||| ||||| | |||||| ||| | |||| |||||||| | || ||| Sbjct 1861 TCGCGCCCGACCTCCACGACTGGGACAACAAGCTCAACGACAACGAGCGCTACTTTATCG 1802 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||||| || |||||||| ||| ||| || ||||| || ||||||||||| || Sbjct 1801 AGCACGTGCTTGCCTTTTT-CGCGGCCTCTGACGGCATTGTCAACGAGAACCTGGTCGAG 1743 Query 1455952 CGCTTTATGAAAGAGGTCCA-ATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 ||||| || ||| |||||| ||||| ||| ||||| ||||||||| Sbjct 1742 CGCTTCTGCGGCGACGTCGGCATTGCC-GAGGCCAAGACGTTCTACGGCTTCCAGATCAT 1684 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACC- 1456069 || || |||||||||||||| || ||||||||||| |||||||| ||| || ||| Sbjct 1683 GATGGAGAACATCCACTCTGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGACGG 1624 Query 1456070 CGGTCG-AGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAG 1456128 || || |||| || ||||||| | || ||||| || | || | | | ||| ||| Sbjct 1623 CGAGCGCAGAA--ACTACCTCTTCCAGGCGATCGAGACCATCCCCTGCATCAAGAAGAAG 1566 Query 1456129 GCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185 ||||||||||| | ||||||| || | || ||| | |||||||||||| | Sbjct 1565 GCCGACTGGGCCCTCCGCTGGATCACGGACGAAAAG----TCGTC-CTTTGCCGAGCGCC 1511 Query 1456186 TCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTT 1456244 | | | |||||| || |||||||||||||| ||||| ||| || | | ||||| | Sbjct 1510 TTATTGCCTTTGCAGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTTTGCCTCGATCTTCT 1451 Query 1456245 GGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGC 1456304 |||||||||||||||||||||||||||| | || ||| |||||| | ||| ||| Sbjct 1450 GGCTCAAGAAGCGCGGCCTCATGCCCGG-CCTCACCTTCTCCAACGAGCTCATCTCGCGC 1392 Query 1456305 GACGA 1456309 ||||| Sbjct 1391 GACGA 1387 Score = 178 bits (196), Expect = 2e-38 Identities = 198/258 (77%), Gaps = 10/258 (4%) Strand=Plus/Minus Query 1456521 AGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGG 1456580 |||| ||| ||||||||| |||| ||| ||||||| ||| ||| | || || || Sbjct 1312 AGATTATCAAGGAGGCCGTCAAGATTGAGCAAGAGTTCCTCACCGACGCCCTCCCCGTCT 1253 Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 ||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||| Sbjct 1252 CGCTCATCGGCATGAACGCCA-AGCTCATGTGCCAGTACATCG-AGTTTGTCGCCGACCG 1195 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGA---CGGCCAACCCGTTCCCAT 1456697 || |||| ||||||||| | || ||| || ||| | | ||||| ||| | Sbjct 1194 TCTCCTCGTCGCGCTCGGCAAC-GAAAAGATCT---GGAACTCTACAAACCCATTCGACT 1139 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGT 1456756 |||||| ||||||||||| |||||||| |||||||||||||| |||||| | | || Sbjct 1138 TTATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTTTTCGAGTCGCGCGTGTCGGCGT 1079 Query 1456757 ACGCCAAGGCCGGCGTCA 1456774 || ||||| | || |||| Sbjct 1078 ACTCCAAGTCGGGTGTCA 1061 >seq165 Length=23858 Score = 181 bits (200), Expect = 2e-39 Identities = 368/543 (68%), Gaps = 29/543 (5%) Strand=Plus/Plus Query 259647 TGGTCTCGGACGAGTTGGTGGCCTTTGTCGCCGAGCACAAGGAGGTCCTCGACGCTGCCA 259706 || ||||||||||| || | ||||| |||||||||| | |||||| | |||| Sbjct 4686 TGATCTCGGACGAGGTGTACGAGGTTGTCATGAAGCACAAGGATGAGCTCGACTCGGCCA 4745 Query 259707 TCTGCCACGGCCGAGACTTTGGCTACTCGTACTTTGGTCTGGCGACCTTGCGCCGGTCCT 259766 | | ||| ||| ||||||| |||| |||||||| | ||| || || || | Sbjct 4746 TTATCTACGACCGCGACTTTGCCTACAACTACTTTGGCTTCAAGACTCTGGAGCGCTCGT 4805 Query 259767 ACCT---GACCA--AAGTGCGCGATATTGTCGTCGAGCGGCCCCAGTATATGCTCATGCG 259821 |||| | || || || ||| || ||||| |||||| | ||| ||||||| Sbjct 4806 ACCTCCTGCGCATCAACGGCAAGAT-----CGCTGAGCGTCCCCAGCACATGATCATGCG 4860 Query 259822 TGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAATGCGCTGGAGCACGTGCTCGC 259881 |||||| |||| ||| | ||| ||||| | |||| ||| |||| Sbjct 4861 TGTCGCTGTTGG----TAT--------CCACGGTGACAACA---TCGAGCGCGTCCTCGA 4905 Query 259882 CACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGC 259941 |||||| | ||||||| ||| | |||||| || |||| || ||||| || || Sbjct 4906 GACCTACAACCTCATGTCGGAGCGCTATTTCACCCACGCTTCGCCTACCCTCTTCAACGC 4965 Query 259942 CGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGAT 260001 ||||| || |||||| || || ||||| || | | |||||||| ||| ||||| Sbjct 4966 TGGCACTCCCAATGCGCAGATGTCTTCTTGCTTCCTCGTCGCCATGAAGGACGACTCGAT 5025 Query 260002 CGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCAT 260061 || || ||||| ||||| |||||| ||||||| ||||| ||| | ||||| || || Sbjct 5026 TGACGGTATCTACGACACCCTCAAGACCTGCGCGCAGATCTCTAAGACTGCCGGAGGTAT 5085 Query 260062 CGGTTTTGCCGCA--CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGC 260119 |||| | || || ||||| | || ||| |||| | ||| | |||| |||||||| Sbjct 5086 CGGTCT--CCACATCCACAACATCCGTGCCAAGGGCTCGTACATTTCGGGAACCAACGGT 5143 Query 260120 CAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGAC 260179 | |||||||| | || |||||||| || | | ||| || ||||| ||||||||| Sbjct 5144 TACTCCAACGGTATCGTCCCCATGCTCCGTGCCTACGACGCGACTGCGCGTTACGTCGAC 5203 Query 260180 CAG 260182 ||| Sbjct 5204 CAG 5206 Score = 93.3 bits (102), Expect = 6e-13 Identities = 321/502 (64%), Gaps = 12/502 (2%) Strand=Plus/Plus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| || || |||||| ||| || || || |||||||||||| || | ||| Sbjct 5215 CAAGCGCCCCGGTGCGTTTGCCATCTATCTCGAGCCATGGCACGCCGACGTCTTTGACTT 5274 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || ||||| | |||||||||||||||| |||| ||| || || | | ||||| Sbjct 5275 CCTTGACCTGAGGAAGAACCACGGCAAGGA----GGAGGTCCGTGCCCGTG--ACCTCTT 5328 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| || |||| |||||| || ||| || | | | | | | |||||| | Sbjct 5329 CTACGCTCTCTGGATCCCCGACCTCTTCATGAAGCGTGTCGAGCAGGACGGTGACTGGAC 5388 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 ||| | ||||| ||||| |||||||| ||| | | | || ||||| Sbjct 5389 ACTCATGTGCCCCGCCGAGTGCCCCGGCCTCGCCGACGTCCACTCTGAGGAGTTTGAGAA 5448 Query 262036 CCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCCGCACGACA 262092 || || ||| || |||| || | | ||| || | Sbjct 5449 GCTGTACGAGAGCTACGAGAAGGCTGGCAAGGGTCGCAAGACCATCAAGGC-GCA-GA-A 5505 Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152 | | |||| |||| ||| |||||| | |||||| || |||| ||| ||||||| Sbjct 5506 GCTGTGGTTCTCCATCCTCGAGGCCCAGACCGAGACTGGTGGTCCCTTCATCCTCTACAA 5565 Query 262153 GGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGCCAACCT 262212 ||| |||| |||| | |||||||||| |||| ||||||| | | ||||||| Sbjct 5566 GGATGCCGCCAACTCCAAGTCCAACCAGCAGCACCTCGGCACCATCAAGTCGTCCAACCT 5625 Query 262213 GTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAACCTCTCGAG 262272 |||||| ||||| || ||| ||||||||| ||||| || |||||||| || Sbjct 5626 GTGCACTGAGATTATCGAGTACTCGTCGCCCGACGAGGTCGCCGTCTGCAACCTTGCGTC 5685 Query 262273 CGTGGCCCTGCCCAAGTTTGTC 262294 || || || ||| ||| ||| Sbjct 5686 GGTCGCTCTCCCCGCGTTCGTC 5707 Score = 87.8 bits (96), Expect = 3e-11 Identities = 163/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 263177 TCAAGGCTCTCTTCAAGACCGTGTGGGAGGTG-CCCAACCGGGTGACCATTGATATGGCG 263235 ||||||| ||| |||||| ||||||||| | ||||| || | | || || | || Sbjct 6372 TCAAGGCGATCTACAAGACTGTGTGGGAGATCTCCCAAAAGGCCGTC-ATCGACCTCGCC 6430 Query 263236 GCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACCCG 263295 |||||||| | ||| | |||||||| |||||||||||| | |||| ||| ||||| Sbjct 6431 GCCGACCGTGGTGCCTTTATCGACCAGTCGCAGTCGCTCAACATCCACCTGGCCAACCCG 6490 Query 263296 AC-GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGACTGG 263354 | | ||| |||| || |||||| ||| | ||| || |||||||| || Sbjct 6491 TCATTCTCCCAGC-TCACCTCCATGCACTTCTACGGCTGGAAGAAGGGACTCAAGACCGG 6549 Query 263355 CATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGA 263408 ||||| || || || || || |||||| | || || || ||||||||||| Sbjct 6550 TGCCTACTACCTCCGTACGCGCCCAGCTGCCCAGGCTATCCAGTTCACCGTCGA 6603 >seq236 Length=14460 Score = 136 bits (150), Expect = 6e-26 Identities = 179/247 (72%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 ||||||||||| | |||||| || ||||||||||| |||||| || | | | Sbjct 9684 TCGTACTCGTCGTACATCTACCGTGTCCTCAAGCAGGTCCACCCCGACACTGGT-----A 9738 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || ||||||||| ||||| | ||| | |||||||| ||| ||||| |||| || ||| Sbjct 9739 TC-TCCAACAAGGCCATGGCCATCCTCAACTCGTTCGTCTCGGACATCTTCGAGCGTATC 9797 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 | ||||||||| || ||| | |||| | ||| || ||| | |||||| Sbjct 9798 GCGACCGAGGCCTCCAAGCTTGCGTCGTACAACCACCGCTCGACCATCTCGTCCCGCGAG 9857 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 |||||||||||||| ||||| ||| | | ||| || || ||| ||||||| |||| ||| Sbjct 9858 ATCCAGACCGCCGTCCGCCTCATCCTCCCCGGAGAGCTTTCCAAGCACGCCATCTCTGAG 9917 Query 725136 GGCACCA 725142 ||||||| Sbjct 9918 GGCACCA 9924 >seq216 Length=265472 Score = 113 bits (124), Expect = 6e-19 Identities = 132/173 (76%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 || ||||| |||| |||||||| |||||||||| ||||||||| |||| | ||||| Sbjct 179777 GCCGACCTCATCACTTGGGGCGCAATCGGTGCGCGTACCACCGAGTCCCAGCTCCACCGT 179836 Query 165810 GAGATGGCGTC-GGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGT 165868 ||| |||| || ||||| | | | ||||| |||||||| ||| |||||||||||||||| Sbjct 179837 GAGCTGGCTTCCGGCGCCTC-GTTCCCCATCGGCTTCAAGAACGGCACCGACGGCAGCGT 179895 Query 165869 -GGCGACGGCCCTCGATGCCGTGCGCACTGCCGCCCAGCCACACACCTTTCTC 165920 |||| | || | || ||| ||| | ||| ||| || |||| ||| ||| Sbjct 179896 CGGCGTC-GCTGTTGACGCCATGCAGTCCGCCAACCACCCCCACAACTTCCTC 179947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177777056049348