Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq33 96.9 3e-15 seq339 84.2 2e-11 >seq33 Length=47741 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||||| | |||| ||||||||||||| || || Sbjct 13018 GTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCGAGCTGCTTGCCT 12959 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| ||||||| ||||| || || || || | |||||| || || ||||||| || Sbjct 12958 GCGAAAATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 12899 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | || || ||||| || || || | || || |||| || Sbjct 12898 ACATTGTCAATGGTGTCAGAGGACTCGACTTCCAGGGTGATCGTCTTCCCGGTCAAGGTC 12839 Query 27231 TTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 12838 TTGACGAAGATCTGCATA 12821 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | || | || |||||||| || ||| Sbjct 12562 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCGAGCTGCTTTCCG 12503 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||||||||||||||| || || || | |||||| || || ||||||| || Sbjct 12502 GCGAAAATGAGACGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 12443 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | |||||| | | || || || ||||| || | || || || ||||| Sbjct 12442 ACATTGTCGATAGTGTCGGACGACTCGACCTCGAGAGTAATGGTCTTCCCGGTAAGAGTC 12383 Query 27231 TTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 12382 TTGACGAAGATCTGCATA 12365 >seq339 Length=62760 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| | | |||| |||| |||||||| || ||| Sbjct 1604 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 1545 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || || || || | ||||| || || ||||||| || Sbjct 1544 GCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1485 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | || || || || || || || | |||||||| || || Sbjct 1484 ACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTC 1425 Query 27231 TTCACAAAGATTTGCA 27246 || || || || |||| Sbjct 1424 TTGACGAAAATCTGCA 1409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932566673648