Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq165 181 1e-40 seq39 122 1e-22 >seq165 Length=23858 Score = 181 bits (200), Expect = 1e-40 Identities = 538/818 (66%), Gaps = 25/818 (3%) Strand=Plus/Minus Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339 |||||| | ||| || || || | |||||| ||| || || || | | || ||||| Sbjct 5647 GTACTCGATAATCTCAGTGCACAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTT 5588 Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399 ||| |||| |||||||||||||| ||| |||| || ||||| ||||| | Sbjct 5587 GGACTTGGAGTTGGCGGCATCCTTGTAGAGGATGAAGGGACCACCAGTCTCGGTCTGGGC 5528 Query 111400 TTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGG--CCCGTCCCT- 111455 | ||| || | ||| | | || ||| || | |||| ||| ||| | || Sbjct 5527 CTCGAGGATGGAGAACCACAGCTTCTGCGCCTTG----ATGGTCTTGCGACCCTTGCCAG 5472 Query 111456 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 111515 || |||||| | ||| || |||||||||||| |||||| ||| || | Sbjct 5471 CCTTCTCGTAGCTCTCGTACAGCTTCTCAAACTCCTCAGAGTGGACGTCGGCGAGGCCGG 5412 Query 111516 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAA 111575 | || | | || || | || | ||| | ||| | | ||| || ||||||||||| | Sbjct 5411 GGCACTCGGCGGGGCACATGAGTGTCCAGTCACCGTCCTGCTCGACACGCTTCATGAAGA 5352 Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGG 111634 |||| || ||||| || | | ||||| || | ||| || |||| || | || ||| Sbjct 5351 GGTCGGGGATCCAGAGAGCGTAGAAGAGGTCACGGGCACGGA-CCTCCTCCTTGCCGTGG 5293 Query 111635 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 111694 || | | |||||||| || | || || |||||||||||||| ||||||| || Sbjct 5292 TTCTTCCTCAGGTCAAGGAAGTCAAAGACGTCGGCGTGCCATGGCTCGAGATAGATGGCA 5233 Query 111695 ATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAAT 111748 | | || | ||| ||| | || | || || ||||| || |||| | Sbjct 5232 AACGCACCGG---GGCGCTTGTTACCACCCTGGTCGACGTAACGCGCAGTCGCGTCGTAG 5176 Query 111749 ACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT--ACGAGATT 111806 | || ||||| || | ||||| | || | ||| || || ||| ||| ||||| Sbjct 5175 GCACGGAGCATGGGGACGATACCGTTGGAGTAACCGTTGGTTCCCGAAATGTACGAGCCC 5116 Query 111807 TATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCG 111866 | |||| | | | |||||||| | || ||||| || || ||| ||||| |||| Sbjct 5115 T--TGGCACGGATGTTGTGGATGTGGAGACCGATACCTCCGGCAGTCTTAGAGATCTGCG 5058 Query 111867 CACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGA 111926 | || | | || || | |||||||||| || ||||| ||||| |||||| |||| Sbjct 5057 CGCAGGTCTTGAGGGTGTCGTAGATACCGTCAATCGAGTCGTCCTTCATGGCGACGAGGA 4998 Query 111927 AGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAA 111986 ||||| |||||||||| | || || ||||| ||||||||||| || | ||||| Sbjct 4997 AGCAAGAAGACATCTGCGCATTGGGAGTGCCAGCGTTGAAGAGGGTAGGCGAAGCGTGGG 4938 Query 111987 TGAACATA-CCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCG 112045 |||| ||| | | ||||| || ||| ||||| | ||| || |||| || ||| Sbjct 4937 TGAA-ATAGCGCTCCGACATGAGGTTGTAGGTCTCGAGGACGCGCTCGATGTTGTCACCG 4879 Query 112046 TGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||||| || | ||||| ||||||| ||||| ||| || Sbjct 4878 TGGATACCAACAGCGACACGCATGATCATGTGCTGGGG 4841 >seq39 Length=45975 Score = 122 bits (134), Expect = 1e-22 Identities = 300/446 (67%), Gaps = 12/446 (3%) Strand=Plus/Plus Query 122380 ACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 122439 || ||| ||| || ||||||| ||| || | || || | ||||||||||| ||| Sbjct 1087 ACGCGCGACTCGAAAAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATAAAGTCGAAT 1146 Query 122440 GGATTCTTCGCGTTCCAAATGGGTG-GCACCCCAACTTGTTTGAGGAGACGATCCGACAC 122498 || || | | |||||| || | | || | | | ||||||||| || | || Sbjct 1147 GGGTTTGTAGAGTTCCAGATCTTTTCGTTGCCGAGCGCGAC-GAGGAGACGGTCGGCGAC 1205 Query 122499 ATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG-GTTACATGGGAGTG 122557 | |||| ||||||| | |||| || | |||||| |||||||| | || ||||| | Sbjct 1206 AAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGCGAGACG-GGGAGGG 1264 Query 122558 CGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATAGTTT 122617 |||| || |||| ||| |||||||| || ||||| || | || | ||| || | Sbjct 1265 CGTCGGTGAGGAACTCTTGCTCAATCTTGACGGCCTCCTTGATAATCTTGGCGATCGTGT 1324 Query 122618 C-GGTAGTGGGTCTATTACGCA--AAGT-CTTGAAGAGCTCCACGGCAAACTCCTGGTGG 122673 | || ||||| ||| | || | |||||| |||||| || |||| Sbjct 1325 CCGGGTGTGGGCGG----CGCTGGAGGTGCGAGAAGAGGAGGCAGGCAAAGTCGGTGTGG 1380 Query 122674 AGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGC 122733 || ||||| || || || || || || || |||||| || || |||||||| || ||| Sbjct 1381 AGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCGCGC 1440 Query 122734 TTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCA 122793 ||||| | ||| | || | | || || || ||||||||||| ||||| || ||| Sbjct 1441 TTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAGATGCCCTCGACGGCTGCA 1500 Query 122794 AACGCAAAAAGGCGTTCGGCGAAGGA 122819 || |||| |||||| ||||| ||||| Sbjct 1501 AAGGCAATAAGGCGCTCGGCAAAGGA 1526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029220958400