Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq165 183 4e-41 seq39 131 2e-25 seq220 118 1e-21 >seq165 Length=23858 Score = 183 bits (202), Expect = 4e-41 Identities = 410/611 (67%), Gaps = 15/611 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || || | ||||| || || || |||| || ||| Sbjct 4841 CCCCAGCACATGATCATGCGTGTCGCTGTTGGTATCCACGGTGACAACATCGAGCGCGTC 4900 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || ||||| | | ||| |||| ||||| | || |||||||| Sbjct 4901 CTCGAGACCTACAACCTCATGTCGGAGCGCTAT-TTCACCCACGCTTCGCCTACCCTCTT 4959 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| ||||| || || | | || ||||| ||||||||| |||||| ||||| || Sbjct 4960 CAACGCTGGCACTCCCAATGCGCAGATGTCTTCTTGCTTCCTCGTCGCCATGAAGGACGA 5019 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| || |||||||||| | || || | | || ||||| ||||| ||| || || Sbjct 5020 CTCGATTGACGGTATCTACGACACCCTCAAGACCTGCGCGCAGATCTCTAAGACTGCCGG 5079 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGGGGACA 104518 ||||| || | |||||||| | | | |||| | ||||| ||| ||| || Sbjct 5080 AGGTATCGGTCTCCACATCCACAACATCCGTGCCA--AGGGCTCGTACATTTCGGGAACC 5137 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || ||| | || | ||||| | || ||||| || | | |||| || ||||| || Sbjct 5138 AACGGTTACTCCAACGGTATCGTCCCCATGCTCCGTGCCTACGACGCGACTGCGCGTTAC 5197 Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || | || | ||| ||| | || | | || ||||||| ||||||||| Sbjct 5198 GTCGACCAGGGTGGTAACAAGCGCC---CCGGTGCGTTTGCCATCTATCTCGAGCCATGG 5254 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||| || || | || |||||||| || | ||||| || | ||||||| || Sbjct 5255 CACGCCGACGTCTTTGACTTCCTTGACCTGAGGAAGAACCACGGCAAGGAGGAGGTCCGT 5314 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 ||| || ||||||| |||||||||||| || || |||||||||||| | || ||| || Sbjct 5315 GCCCGTGACCTCTTCTACGCTCTCTGGATCCCCGACCTCTTCATGAAGCGTGTCGAGCAG 5374 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 || | ||| | ||| | || || | | || || || ||| |||| | | | Sbjct 5375 GACGGTGACTGGACACTCATGTGCCCCGCCGAGTGCCCCGGCCTCGCCGACGTCCACTCT 5434 Query 104813 GAGGAGTTTGA 104823 ||||||||||| Sbjct 5435 GAGGAGTTTGA 5445 >seq39 Length=45975 Score = 131 bits (144), Expect = 2e-25 Identities = 132/171 (77%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 94785 AAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTT 94844 ||||||| |||||||| ||||| || | || ||||| || ||||| |||||||| Sbjct 1533 AAAGTCG---TCCTTTGCCGAGCGCCTTATTGCCTTTGCAGCCGTCGAGGGCATCTTCTT 1477 Query 94845 CTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTG 94904 |||||| || || | | || | |||||||||||||| || |||||||| || ||| Sbjct 1476 CTCTGGCTCGTTTGCCTCGATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCAC 1417 Query 94905 CTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||||||||||| ||||| || |||||||| |||||| || ||||| Sbjct 1416 CTTCTCCAACGAGCTCATCTCGCGCGACGAGGGCCTCCACACCGACTTTGC 1366 >seq220 Length=16629 Score = 118 bits (130), Expect = 1e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 94806 GCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTAT 94865 ||||||| ||||||| || || || ||||| || |||||||| || || ||| || || Sbjct 15482 GCGACTCATCGCATTCGCCTGCGTCGAGGGCATATTCTTCTCCGGCTCTTTCGCTGCCAT 15423 Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925 || |||||||||||||| || | |||| ||| ||| ||||||||||||||| ||| Sbjct 15422 TTTCTGGCTCAAGAAGCGTGGCTTGATGCGAGGCCTCACCTTCTCCAACGAGCTCATCAG 15363 Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || ||||||||| | ||| ||| ||||| Sbjct 15362 CCGCGACGAGGGAATGCACACAGACTTTGC 15333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258219070960