Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq310 224 3e-53 seq33 114 4e-20 seq339 104 7e-17 >seq310 Length=76780 Score = 224 bits (248), Expect = 3e-53 Identities = 618/942 (66%), Gaps = 20/942 (2%) Strand=Plus/Plus Query 349213 TTTAGGT-ACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTG 349271 |||||| || ||||| || ||||| || |||||||| ||||| || || || || || | Sbjct 69552 TTTAGGGCACCACTTACTCGTGTGTCGCCGTTTGGCAGAATGACCGCGTTGAGATCATCG 69611 Query 349272 CAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTA 349331 | || || || |||||| | || || || || ||||| || || ||||| | ||||| Sbjct 69612 CCAACGACCAGGGTAACCGCACTACCCCCTCCTACGTCGCTTTCACCGACTCGGAGCGCC 69671 Query 349332 TGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATG 349391 | || |||||| |||| || || || | || || || | || || || || || | Sbjct 69672 TTATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAACCCTTACAACACCGTCTTCGACG 69731 Query 349392 CTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATCTGATCTAAAA 349447 | ||||| |||||||| | | || |||||| | || || || || | || Sbjct 69732 CCAAGCGTCTTATTGGCCGCAAGTTCTCTGACGCCGAGGTC----CAGTCGGACATGAAG 69787 Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATA---AACCAATTATTGAGGTTGAA 349504 || | || || | || || ||| |||| | | || ||||| |||| || Sbjct 69788 CACTGGCCCTTCAAGGTCATT------GACCGTGACACCAAGCCTATTATCCAGGTCGAG 69841 Query 349505 TATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAA 349564 || || || || || || | ||||| || || || || ||||| | || Sbjct 69842 TACCGCGGCGAGCAGAAGACTTTCTCGCCCGAGGAGATCTCGTCCATGGTCCTCACCAAG 69901 Query 349565 ATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTA 349624 |||||||| | || || || || | |||| ||| || | | || || || ||||| Sbjct 69902 ATGAAGGAGACCGCCGAGGCTTACCTCGGTGGAACCGTCTCCAAGGCCGTCATCACTGTC 69961 Query 349625 CCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGG 349684 || ||||| || || || | |||||| || || || || || || | |||| | || Sbjct 69962 CCCGCCTACTTCAACGACTCTCAGCGTCAGGCGACCAAGGACGCCGGTACCATTTCCGGC 70021 Query 349685 TTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGAT 349744 | | || || | || || || || ||||||||||| || ||||| || || || || Sbjct 70022 CTCGAGGTCCTTCGTATTATCAACGAGCCCACTGCTGCGGCCATTGCCTACGGTCTCGAC 70081 Query 349745 AAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGAT 349804 || | ||| || || || || | || || || || | ||||||||||| |||||| Sbjct 70082 AAGAAGAGCGAGGGCGAGAAGAACGTCCTCATCTTCGACCTTGGTGGTGGTACCTTTGAT 70141 Query 349805 GTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACA 349864 || || || || || | || ||||| || || || || || || ||||| ||||| || Sbjct 70142 GTCTCTCTTCTTACCATCGAGGAGGGCATCTTCGAGGTCAAGGCCACTGCCGGTGACACC 70201 Query 349865 CATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAG 349924 || |||||||| || || ||||| || |||||||| || |||||| | || || ||| Sbjct 70202 CACCTTGGTGGTGAGGACTTTGACAACCGTCTCGTCAACCACTTTGTTCAGGAGTTCAAG 70261 Query 349925 CGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGC 349983 || |||| || | || || | || | | || | ||||| || | || || Sbjct 70262 CG-CAAGAACAAGAAGGACATCACCGGCAACGCCCGTGCCCTCCGTCGTCTCCGCACCGC 70320 Query 349984 GTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTC 350043 ||||| ||||| ||||| || | || || | | || ||| ||||||| || || || Sbjct 70321 CTGTGAGCGTGCCAAGCGCACCCTCTCGTCGGCCGCACAGACCACTATTGAGATCGACTC 70380 Query 350044 TCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATG 350103 || ||| |||| || |||| | || || || ||||| || || || || | || Sbjct 70381 GCTCTTTGACGGCATCGACTTCTACACCTCCATCACCCGTGCCCGTTTCGAGGAGCTCTG 70440 Query 350104 TATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGT 350145 ||| || || | | || ||||| || || || || || Sbjct 70441 CCAGGACCTCTTCCGCTCCACCATGGAGCCCGTAGAGAAGGT 70482 >seq33 Length=47741 Score = 114 bits (126), Expect = 4e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || |||||||| ||||| || || || || || || Sbjct 12140 CATACCACCACGCAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTC 12081 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || || |||||||| || || ||||| || || Sbjct 12080 GGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGG 12021 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 || || || || || ||||| || || ||| || || || ||||| | || || | | Sbjct 12020 GGGGATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCAATGGTGTCCGAAGACT 11962 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || | ||||| || || || || || ||||| |||||||| Sbjct 11961 CGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 11910 >seq339 Length=62760 Score = 104 bits (114), Expect = 7e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||||| || || || || || || Sbjct 1638 CATACCACCACGCAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 1579 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || ||||| ||||| ||||| || || Sbjct 1578 CGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGG 1519 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || || || ||||| | || || | || Sbjct 1518 GGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTC 1459 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCA 140736 || ||||| || | ||||| || || || || || || |||||||||| Sbjct 1458 GACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCA 1409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515247527374262