Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq33 136 3e-27 seq339 116 3e-21 >seq33 Length=47741 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||||||||||||| | |||||| | |||||||| ||||| Sbjct 12594 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACAATTACTTTGGAAGTGGAGTCGTCC 12653 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||| || || ||||| || || || || ||||| || Sbjct 12654 GACACCATTGACAACGTAAAGTCAAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAG 12713 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||| || || | || ||| | ||| | ||||| |||||| Sbjct 12714 CAGCGTCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 12773 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | || | ||| | || | || ||||| || Sbjct 12774 ATCCAGAAGGAGTCTACCCTCCACCTTGTTCTTCGCCTCCGCGGTGGTAT 12823 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||| || || || |||||| | ||||| || || || || | ||| Sbjct 12138 ATGCAGATCTTCGTAAAGACCCTCACGGGCAAGACCATTACGCTCGAGGTTGAGTCTTCC 12197 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| ||||| || || || || || || || Sbjct 12198 GACACGATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCTGACCAG 12257 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | || ||||| || | || ||| | || | ||||| |||||| Sbjct 12258 CAGCGCTTGATCTTTGCGGGCAAGCAGCTCGAGGACGGACGTACGCTGTCCGACTACAAC 12317 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| || || ||||| | ||| |||| ||||| || Sbjct 12318 ATCCAGAAGGAGTCGACTTTGCACTTGGTGCTCCGTCTGCGCGGTGGTAT 12367 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| | || || || || || || | || Sbjct 11910 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGTCTTCG 11969 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || ||||| || ||||| || ||||| || Sbjct 11970 GACACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 12029 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || ||||| || | || || | ||| | ||||| |||||| Sbjct 12030 CAGCGCCTTATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAAC 12089 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | || | ||| |||| ||||| || Sbjct 12090 ATCCAGAAGGAGTCGACTCTTCACCTCGTCCTCCGTCTGCGTGGTGGTAT 12139 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||| ||| | || || || ||||| || | || Sbjct 12822 ATGCAGATCTTCGTCAAGACCTTGACCGGGAAGACGATCACCCTGGAAGTCGAGTCCTCT 12881 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || ||||| || || || || ||||| || Sbjct 12882 GACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 12941 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | |||||| | || | ||| |||||| Sbjct 12942 CAGCGCCTCATTTTCGCAGGCAAGCAGCTCGAAGACGGCCGCACGCTCAGCGACTACAAC 13001 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || |||||||||||| | || |||| | ||| | || || ||| Sbjct 13002 ATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGTCTCCGTGGCGGC 13049 >seq339 Length=62760 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26989 TGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCG 27048 ||||||| || || || || || || |||||| | || || ||||| || || | || | Sbjct 1409 TGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGG 1468 Query 27049 ACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAAC 27108 || | ||||| | ||||| || || || ||||| || ||||| || ||||| || | Sbjct 1469 ACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGC 1528 Query 27109 AGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACA 27168 ||||| | || | ||||||||| || | || ||| | ||| |||| || ||||||| Sbjct 1529 AGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACA 1588 Query 27169 TTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || |||||||||||| | || | || | || |||| ||||| || Sbjct 1589 TCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGCCTGCGTGGTGGTAT 1637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916475486080