Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq33 179 9e-40 seq339 168 2e-36 seq9 122 2e-22 >seq33 Length=47741 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||||||||| ||||| || |||||||| || || | ||||| | ||||| Sbjct 12121 AGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCC 12062 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||||||||| || ||||| || || | || ||||||||| Sbjct 12061 TCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 12002 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || |||||||| || || |||||||| ||||| ||| Sbjct 12001 TGGATCTTGCTCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTC 11942 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| ||||| | |||||| Sbjct 11941 TTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 11910 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| | ||| ||||| || |||||||| || || | || || | ||| || Sbjct 12349 AGCACCAAGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGTCCGTCC 12290 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | ||| || |||||||| || | ||| ||||||||| Sbjct 12289 TCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 12230 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct 12229 TGAATCTTGCTCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGCGTAATGGTC 12170 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| |||||||| || | |||||| Sbjct 12169 TTGCCCGTGAGGGTCTTTACGAAGATCTGCAT 12138 Score = 158 bits (174), Expect = 3e-33 Identities = 170/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | ||||| ||||| || |||||||| || |||||||| || || | ||| Sbjct 12590 TCCACGGAGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAG 12531 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||| || |||||||| || ||||| || || || |||||||| || || | Sbjct 12530 AGTACGGCCATCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGGGGGAT 12471 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||||||||||||||| || || || ||||| ||||| || || ||||| Sbjct 12470 ACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCGACCTC 12411 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| || ||||| || || |||||||| || || | |||||| Sbjct 12410 GAGAGTAATGGTCTTCCCGGTAAGAGTCTTGACGAAGATCTGCAT 12366 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || || || | || ||| Sbjct 13033 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCT 12974 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||||||||| || ||||| || ||||| ||||| | || ||||||||| Sbjct 12973 TCGAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 12914 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || |||||||||||| || || || || ||||||||| Sbjct 12913 TGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCGACTTCCAGGGTGATCGTC 12854 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 12853 TTCCCGGTCAAGGTCTTGACGAAGATCTGCAT 12822 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || || ||||| || |||||||| || || | ||||| | || || Sbjct 12805 AGAACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 12746 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| || || || ||||| || || | || ||||||||| Sbjct 12745 TCGAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCC 12686 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| || |||||||| || || || || | ||| || ||| Sbjct 12685 TGGATCTTTGACTTTACGTTGTCAATGGTGTCGGACGACTCCACTTCCAAAGTAATTGTC 12626 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || |||||||| ||||| | ||||||| Sbjct 12625 TTGCCGGTCAGAGTCTTGACAAAGATCTGCATT 12593 Score = 136 bits (150), Expect = 9e-27 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 210948 AGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGA 211007 ||||| | || || || ||||||||||| |||||||| ||||| || ||||| || || Sbjct 11802 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 11743 Query 211008 ACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACC 211067 | || ||||||||||||||||| || ||||| ||||| ||||| ||| || ||| Sbjct 11742 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCCGAGGACTCGACC 11683 Query 211068 TCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| ||||| || ||||| ||||| || || | |||||| || Sbjct 11682 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATCTT 11633 >seq339 Length=62760 Score = 168 bits (186), Expect = 2e-36 Identities = 164/211 (78%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || |||| |||||| | || || Sbjct 1619 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 1560 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || || | || ||||||||| Sbjct 1559 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 1500 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || |||||||| ||| || ||||| || ||||| ||| Sbjct 1499 TGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTC 1440 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 || |||||||| ||||| || || | ||||| Sbjct 1439 TTGCCCGTGAGGGTCTTGACGAAAATCTGCA 1409 >seq9 Length=54263 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || |||| ||| || | || || || ||||||||||| ||||||||||| || || ||| Sbjct 1293 TAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGG 1352 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 ||||| || | || ||||||||||||||||| || ||||| ||||| ||||| || Sbjct 1353 TCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAA 1412 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAG 211093 || |||||||| ||||| ||||| ||||| || Sbjct 1413 GACTCCACCTCGAGGGTGATAGTCTTACCCGTCAG 1447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146742521210