Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq33 140 8e-28 seq339 120 7e-22 seq9 98.7 2e-15 >seq33 Length=47741 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| |||||||| ||||| || || |||| ||||| |||| | ||| Sbjct 12587 ACGGAGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT 12528 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || ||||| || || || ||||||||||| || ||||| Sbjct 12527 ACGGCCATCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGGGGGATACC 12468 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||| ||||| || | || || || | Sbjct 12467 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCGACCTCGAG 12408 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| || | ||| | ||||| Sbjct 12407 AGTAATGGTCTTCCCGGTAAGAGTCTTGACGAAGATCTGCAT 12366 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| || || || || |||| ||||| |||| | || | || || Sbjct 12805 AGAACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 12746 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || ||||||||||| ||||| |||||||| Sbjct 12745 TCGAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCC 12686 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || || |||||||| || | ||||| || || || || ||| Sbjct 12685 TGGATCTTTGACTTTACGTTGTCAATGGTGTCGGACGACTCCACTTCCAAAGTAATTGTC 12626 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| |||| ||| || | || | |||||| Sbjct 12625 TTGCCGGTCAGAGTCTTGACAAAGATCTGCATT 12593 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| ||| | || | || ||| Sbjct 13033 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCT 12974 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || || || || |||||||| || ||||| |||||||| Sbjct 12973 TCGAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 12914 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || |||||||| |||| || || || | ||||||||| Sbjct 12913 TGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCGACTTCCAGGGTGATCGTC 12854 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| | ||||| Sbjct 12853 TTCCCGGTCAAGGTCTTGACGAAGATCTGCAT 12822 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| | ||| || || || |||| ||||| |||| || || | || || Sbjct 12349 AGCACCAAGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGTCCGTCC 12290 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| | || || ||||| || || || || |||||||| Sbjct 12289 TCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 12230 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| ||||| || | || || || | ||| || ||| Sbjct 12229 TGAATCTTGCTCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGCGTAATGGTC 12170 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || |||| ||| | ||||| Sbjct 12169 TTGCCCGTGAGGGTCTTTACGAAGATCTGCAT 12138 >seq339 Length=62760 Score = 120 bits (132), Expect = 7e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || || || || |||| ||||| || | | || | || || Sbjct 1619 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 1560 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || |||||||| || || || |||||||| Sbjct 1559 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 1500 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| |||| || || || | ||||| ||| Sbjct 1499 TGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTC 1440 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCA 225712 |||||||| | || || | ||| | |||| Sbjct 1439 TTGCCCGTGAGGGTCTTGACGAAAATCTGCA 1409 >seq9 Length=54263 Score = 98.7 bits (108), Expect = 2e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 225533 CATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTT 225592 || |||| || | | ||| | || || || |||||||| || ||||||||||| || | Sbjct 1288 CACTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCT 1347 Query 225593 GTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGT 225652 | ||||| || || || || |||||||| |||||||| ||| || ||||| |||| Sbjct 1348 GCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGT 1407 Query 225653 CTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCA 225691 | || | ||||| || | ||||| ||||| ||||||| Sbjct 1408 CGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCA 1446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192525791125676