Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq33 122 2e-22 seq339 107 4e-18 >seq33 Length=47741 Score = 122 bits (134), Expect = 2e-22 Identities = 157/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| || || |||||||| || ||||||||||| |||| | || | || || Sbjct 12805 AGAACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 12746 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||| ||||| || | ||||||||| | || ||| || ||||| | Sbjct 12745 TCGAGCTGCTTT--CCGGCAAAGATCAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGT 12688 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || ||| || || | || | | |||| || ||| ||||| | |||||| | Sbjct 12687 CCTGGATCTTTGACTTTACGTTGTCAATGGTGTCGGACGACTCCACTTCCAAAGTAATTG 12628 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | ||||| || |||||||| || |||| ||||||| Sbjct 12627 TCTTGCCGGTCAGAGTCTTGACAAAGATCTGCATT 12593 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || |||||||| ||||| || ||||||||||| |||| | || | ||||| Sbjct 12122 GAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 12063 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || || |||||||| | ||||||||| | | ||| || ||||| || Sbjct 12062 CTCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 12003 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | |||| ||| ||| || || || || || || Sbjct 12002 CTGGATCTTGCTCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGT 11943 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| || |||| |||||| Sbjct 11942 CTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 11910 Score = 114 bits (126), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| |||| | ||| | ||||| Sbjct 12577 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 12518 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| |||||||| || || | ||| ||||| | | ||| || ||||| | Sbjct 12517 TCGAGCTGCTTT--CCGGCGAAAATGAGACGCTGTTGGTCGGGGGGGATACCCTCCTTGT 12460 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || || |||||| | || | |||| || ||| || || |||||||| | Sbjct 12459 CCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCGACCTCGAGAGTAATGG 12400 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || |||||||| ||||||| |||||| Sbjct 12399 TCTTCCCGGTAAGAGTCTTGACGAAGATCTGCAT 12366 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| ||||| || ||||||||||| |||| | || | || || || | Sbjct 12344 CAAG-TGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGTCCGTCCTCGA 12286 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | | ||||||||| | | |||||| ||||| || |||| Sbjct 12285 GCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGAA 12226 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| ||| ||| || || || ||||| || |||| Sbjct 12225 TCTTGCTCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGCGTAATGGTCTTGC 12166 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||| ||||| ||||||| |||||| Sbjct 12165 CCGTGAGGGTCTTTACGAAGATCTGCAT 12138 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || ||||||||||| ||| | || | Sbjct 13040 GAGACGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCG 12981 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || || ||||| || || | ||||||||| | | ||| || || Sbjct 12980 GCCGTCTTCGAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGGTCGGGAGGGATACCCTC 12921 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| | || | | |||| || ||| ||||| || || Sbjct 12920 CTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCGACTTCCAGGGT 12861 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | ||||| ||||||| |||||| Sbjct 12860 GATCGTCTTCCCGGTCAAGGTCTTGACGAAGATCTGCAT 12822 Score = 84.2 bits (92), Expect = 5e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||||||||| || | ||||||||| | | ||| || ||||| || || || || Sbjct 11778 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTG 11719 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||||| | || | |||| || ||| || || || || || || ||||| ||| Sbjct 11718 GACTTGACGTTGTCGATAGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 11659 Query 152082 AGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||||||||||| |||||| || Sbjct 11658 AGGGTCTTCACGAAGATCTGCATCTT 11633 >seq339 Length=62760 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || || || ||||| || ||||||||||| || | | || | || || Sbjct 1620 GAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTC 1561 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||| | | ||| || ||||| || Sbjct 1560 CTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 1501 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | |||| || ||| || ||||| || || || Sbjct 1500 CTGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGT 1441 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCA 152103 ||||||||||| ||||| ||||| | ||||| Sbjct 1440 CTTGCCCGTGAGGGTCTTGACGAAAATCTGCA 1409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153815566701534