Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq33 179 8e-40 seq339 167 5e-36 seq9 132 1e-25 seq10 95.1 3e-14 seq39 91.5 3e-13 seq293 89.7 1e-12 >seq33 Length=47741 Score = 179 bits (198), Expect = 8e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || |||||||| || || || | || || || |||||||||||||| | Sbjct 12821 ACCACCGCGGAGGCGAAGAACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 12762 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||||||||||| ||| || ||||| ||| Sbjct 12761 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGCGG 12702 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||||| |||||| | || || ||||| || | || || Sbjct 12701 GATACCCTCCTTGTCCTGGATCTTTGACTTTACGTTGTCAATGGTGTCGGACGACTCCAC 12642 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| | ||| || ||||| || |||| |||||| || || ||||||||| Sbjct 12641 TTCCAAAGTAATTGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCATT 12593 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || || || | ||| || || |||||||||||||| | | Sbjct 12592 CCTCCACGGAGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 12533 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| || || || ||||| || || | ||| |||||||| || Sbjct 12532 AGAGTACGGCCATCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGGGGG 12473 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| | || || | ||||||||||| || | ||||| Sbjct 12472 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCGACC 12413 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| || ||||| || || | |||||| ||||| |||||||| Sbjct 12412 TCGAGAGTAATGGTCTTCCCGGTAAGAGTCTTGACGAAGATCTGCAT 12366 Score = 158 bits (174), Expect = 3e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | || || || |||||||||||||| | Sbjct 12137 ACCACCACGCAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 12078 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || |||||||| | || || ||||| || Sbjct 12077 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGGGGG 12018 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || ||||||||||| |||||| ||||| || ||| | || || |||||||||| |||| Sbjct 12017 GATGCCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCAATGGTGTCCGAAGACTCGA 11959 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| ||||| ||||| || || | ||||| || || |||||||| Sbjct 11958 CCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 11910 Score = 158 bits (174), Expect = 3e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || || |||| || || || || || |||||||||||||| | Sbjct 12365 ACCACCGCGCAGACGGAGCACCAAGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGA 12306 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| || || ||||| || || || || ||||||||||| || || |||||| || Sbjct 12305 CAGCGTACGTCCGTCCTCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGG 12246 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || ||||||||||| || ||| ||||| || ||| | ||||| ||||| |||| || | Sbjct 12245 GATTCCCTCCTTGTCCTGAATC-TTGCTCTTGACGTTGTCGATCGTGTCGGAAGACTCAA 12187 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| || || ||||| ||||| | ||||| ||||| |||||||| Sbjct 12186 CCTCGAGCGTAATGGTCTTGCCCGTGAGGGTCTTTACGAAGATCTGCAT 12138 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || ||||| || | || || || |||||||||||||| Sbjct 13048 CCGCCACGGAGACGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTG 12989 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| || || || || || || || || || | || || ||||| || Sbjct 12988 AGCGTGCGGCCGTCTTCGAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGGTCGGGAGGG 12929 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| | || || | || || ||||| || | |||||| Sbjct 12928 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCGACT 12869 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 12868 TCCAGGGTGATCGTCTTCCCGGTCAAGGTCTTGACGAAGATCTGCAT 12822 Score = 138 bits (152), Expect = 2e-27 Identities = 139/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| | || |||||||| ||||| || || || ||||| ||||| | || || | Sbjct 11813 TGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT 11754 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| || || ||||||||||| |||||||| | || ||| | ||||||||||||| Sbjct 11753 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCCG 11694 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTT 283101 | | ||||| ||||| ||||| ||||| || || | ||||| ||||| |||||||| | Sbjct 11693 AGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATCT 11634 Query 283102 T 283102 | Sbjct 11633 T 11633 >seq339 Length=62760 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | || || || |||||||||||||| | Sbjct 1635 ACCACCACGCAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 1576 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 1575 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 1516 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | || || |||||||| | ||||| Sbjct 1515 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTCGAC 1456 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098 || || ||||| ||||| ||||| | ||||| ||||| ||||||| Sbjct 1455 CTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCA 1409 >seq9 Length=54263 Score = 132 bits (146), Expect = 1e-25 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| | ||| || ||||| ||||| || || || ||||| ||||| | ||| || | Sbjct 1291 TGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCT 1350 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 ||||| || || ||||||||||| |||||||| | || ||| | ||||||||||| | Sbjct 1351 GGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGG 1410 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCA 283077 ||| || || ||||| ||||| ||||||||||||| Sbjct 1411 AAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCA 1446 >seq10 Length=54222 Score = 95.1 bits (104), Expect = 3e-14 Identities = 178/262 (68%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 273777 TTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAAC 273836 |||||||||||||| | ||| || ||| |||||| ||||| || | | ||| ||| Sbjct 5040 TTCGTGAAAATGTAACGGGCGCTGGCAGCGTCCTTACCACCCGCCATACGAGTACCGAAC 5099 Query 273837 TGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTC 273896 || || | |||| |||| ||| ||||||||||| ||||| | | ||| |||| Sbjct 5100 TGTCCATTGGGCTCTAGCAGGTTGATGTTGTTGCTCCCGACAAAGTTCTGCGCCAGGCCG 5159 Query 273897 ACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAA 273956 ||||| ||| | ||| || || |||||||| || || ||| || || ||| Sbjct 5160 ACGATGGTCGACATAAGACTGACTTCACCGTGGTGGTACTCGGTGTTCTCACTGACATAG 5219 Query 273957 CCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAAC 274016 ||| | || || ||||| | || || ||||||| |||||||| | | | | Sbjct 5220 CCAACAAGTTGTGCCACCTTGATTTCCTTCTTCAAGTTGCGCTTGAAACTGCCAAAGATG 5279 Query 274017 ACCTTCCGCTGCGAGGGCTTGA 274038 ||||| ||||| |||||||| Sbjct 5280 ACCTTGCGCTGACCGGGCTTGA 5301 >seq39 Length=45975 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || ||||||||||| || | |||||| | || || ||||| || || || || ||| | Sbjct 1250 CTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGTCTC 1191 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| ||||| || |||| || | | ||||| | ||||| |||| ||||||||| Sbjct 1190 CTCGTCGCGCTCGGCAACGAAAAGATCTGGAACTCTACAAACCCATTCGACTTTATGGAG 1131 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGA 230377 | || || |||||||| || | ||||| ||||| Sbjct 1130 ATGATCTCGCTCCAGGGCAAGGCCAACTTTTTCGA 1096 >seq293 Length=87969 Score = 89.7 bits (98), Expect = 1e-12 Identities = 170/247 (69%), Gaps = 5/247 (2%) Strand=Plus/Minus Query 316166 TGTCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGAT 316225 |||| ||||||| |||||||| | |||||||| ||| ||| |||| || || | Sbjct 2964 TGTCCTCACCGGTCTGGTAACGCCAGAGCATGTACTGGAGGGGAGTCTTGTCGAGGTGGT 2905 Query 316226 CCTCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAA-GACGCATATTTGGATGCTTC 316284 ||||||||||||||||||||||| || |||||| ||| ||| | || || |||||| Sbjct 2904 GGTCGATGTGGTGGAAAGCGTGCTGGGCAACGTAACCAATGAC-AAGGTTAGGGTGCTTC 2846 Query 316285 CAAACGCTACCG---TTAGTAGTTTCCATCTGCCCTGTTAGCACTTTAATGAGAGTACTT 316341 || ||| | ||| || | | || ||| || || || | || | ||||||| Sbjct 2845 CAGACGGTTCCGCCCTTGTTGGGCTCGGTCTCGCCAGTAAGGAGCTTGACGAGAGTAGAC 2786 Query 316342 TTTCCCGCGCCGTTTTCACCCACGACACCGATCCTGGAGTTGAGCGATACCTGGGCATTC 316401 ||||| | ||||| ||| | ||| ||| | || |||||| |||||| || Sbjct 2785 TTTCCGGAACCGTTGGGACCGAGGACGGCGACACGCGACGAGAGCGAGACCTGGAGGTTG 2726 Query 316402 ACGTTGT 316408 | ||||| Sbjct 2725 ATGTTGT 2719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046734452383516