Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq339 147 5e-30 seq33 138 3e-27 seq9 127 5e-24 >seq339 Length=62760 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || |||||||| ||||| || ||| ||| Sbjct 1411 CAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGAC 1470 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 1471 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 1530 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || ||| | || || ||| || Sbjct 1531 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATC 1590 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 1591 CAGAAGGAGTCGACCCTCCACCTCGT 1616 >seq33 Length=47741 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || |||||||||||||| || || ||| Sbjct 11913 CAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGTCTTCGGAC 11972 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 11973 ACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 12032 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || |||||||| ||||| | || || |||| || ||| || Sbjct 12033 CGCCTTATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATC 12092 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 12093 CAGAAGGAGTCGACTCTTCACCTCGT 12118 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || || || |||||||| || || ||| Sbjct 12369 CAGATCTTCGTCAAGACTCTTACCGGGAAGACCATTACTCTCGAGGTCGAGTCGTCCGAC 12428 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || ||||| || ||||| || Sbjct 12429 ACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAACAG 12488 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||| |||||||| ||||| | |||||| |||| || ||| || Sbjct 12489 CGTCTCATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACTCTTTCCGACTACAACATC 12548 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 12549 CAGAAGGAGTCCACCCTCCACCTCGT 12574 Score = 136 bits (150), Expect = 1e-26 Identities = 134/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || |||||||||||||| || ||| ||| Sbjct 11639 CAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGAC 11698 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 11699 ACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 11758 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || || ||||||||||| || |||||||| || || | || || |||| || Sbjct 11759 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTA 11811 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || || || |||||||| || || ||| Sbjct 12141 CAGATCTTCGTAAAGACCCTCACGGGCAAGACCATTACGCTCGAGGTTGAGTCTTCCGAC 12200 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || |||||||| || |||||||| Sbjct 12201 ACGATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCTGACCAGCAG 12260 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || |||||||| || ||| | || || |||| || ||| || Sbjct 12261 CGCTTGATCTTTGCGGGCAAGCAGCTCGAGGACGGACGTACGCTGTCCGACTACAACATC 12320 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || |||| |||| Sbjct 12321 CAGAAGGAGTCGACTTTGCA-CTTG 12344 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || ||||||||||| || || || ||| ||| Sbjct 12825 CAGATCTTCGTCAAGACCTTGACCGGGAAGACGATCACCCTGGAAGTCGAGTCCTCTGAC 12884 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||| |||||||| || || |||||||| |||||||| Sbjct 12885 ACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAG 12944 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||||||||||| || | || || ||| || ||| || Sbjct 12945 CGCCTCATTTTCGCAGGCAAGCAGCTCGAAGACGGCCGCACGCTCAGCGACTACAACATC 13004 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 13005 CAGAAGGAGTCGACCCTCCACCTGGT 13030 >seq9 Length=54263 Score = 127 bits (140), Expect = 5e-24 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || || ||||||||||||||||| || ||||| ||||| |||||||| Sbjct 1447 CTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACTATCGACAACGTCAAG 1388 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || |||||||||||||| Sbjct 1387 TCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGTCTTATCTTCGCCGGC 1328 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || |||||||| || || | |||||| | || || Sbjct 1327 AAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTA 1293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203725740326676