Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq33 147 2e-30 seq339 136 4e-27 seq9 104 2e-17 >seq33 Length=47741 Score = 147 bits (162), Expect = 2e-30 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | ||||| |||| || ||||||||| ||||| |||||||| Sbjct 12364 CCACCGCGCAGACGGAGCACCAAGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 12305 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| |||||||||||||| || || |||| |||||| ||||| | ||| Sbjct 12304 AGCGTACGTCCGTCCTCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGG 12245 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| | ||||| | ||| | | | |||||| ||||| | Sbjct 12244 ATTCCCTCCTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCGATCGTGTCGGAAGACTCAA 12187 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | ||| || || || ||||| || ||||||||||| |||||||| Sbjct 12186 CCTCGAGCGTAATGGTCTTGCCCGTGAGGGTCTTTACGAAGATCTGCAT 12138 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | || || || || || ||||||||| ||||| ||||||||| Sbjct 12820 CCACCGCGGAGGCGAAGAACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 12761 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||||||||| ||||| || ||||| ||||| ||||| | || Sbjct 12760 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGCGGG 12701 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| ||| ||| ||| | | | |||||| ||||||||| Sbjct 12700 ATACCCTCCTTGTCCTGGATCTTTGACTT-TACGTTGTCAATGGTGTCGGACGACTCCAC 12642 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || ||||| ||||| || || |||||||| Sbjct 12641 TTCCAAAGTAATTGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 12594 Score = 138 bits (152), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||||||| ||||| |||||||| Sbjct 12592 CCTCCACGGAGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 12533 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || ||||||||||| |||||||| || || ||||||||||| | ||| Sbjct 12532 AGAGTACGGCCATCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGGGGG 12473 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| || | || | ||||||| |||||| | Sbjct 12472 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATAGTGTCGGACGACTCGA 12415 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| ||||| |||||||| Sbjct 12414 CCTCGAGAGTAATGGTCTTCCCGGTAAGAGTCTTGACGAAGATCTGCAT 12366 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | |||||| || || || ||||||||| ||||| |||||| Sbjct 13049 GCCGCCACGGAGACGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 12990 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| |||| |||||||||||||| ||||| || |||||||| ||||| | || Sbjct 12989 GAGCGTGCGGCCGTCTTCGAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGGTCGGGAGG 12930 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| || | | | ||||| ||||| | Sbjct 12929 GATACCCTCCTTGTCCTGGATCTTGGACTT-GACATTGTCAATGGTGTCAGAGGACTCGA 12871 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| || ||||| || || |||| ||||| ||||| |||||||| Sbjct 12870 CTTCCAGGGTGATCGTCTTCCCGGTCAAGGTCTTGACGAAGATCTGCAT 12822 Score = 129 bits (142), Expect = 5e-25 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||||||||||||||| |||| |||||||||||||||||||| || |||||||| ||| Sbjct 11811 TAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG 11752 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCT 41805 || | ||| | || |||||||||| ||| || ||| ||| | | | |||||| Sbjct 11751 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATAGTGTCCGA 11693 Query 41806 CGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| ||||| | || || || || || || || ||||| ||||| |||||||| || Sbjct 11692 GGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATCTT 11633 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||| |||||||| Sbjct 12136 CCACCACGCAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 12077 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||| || || || |||||||| ||||| | ||| Sbjct 12076 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGGGGGG 12017 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | ||||| ||||| || Sbjct 12016 ATGCCCTCCTTGTCCTGGATCTTGCTCTT-GACGTTGTCAATGGTGTCCGAAGACTCGAC 11958 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| || || |||||||| Sbjct 11957 CTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 11910 >seq339 Length=62760 Score = 136 bits (150), Expect = 4e-27 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| ||||| || |||||||| |||| |||||||||||||||||||| Sbjct 1599 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1540 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || ||||| ||||| | ||| | || |||||||||| ||| || ||| ||| Sbjct 1539 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGT 1481 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| ||||| ||||| | || || || || ||||| || ||||| | Sbjct 1480 TGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 1421 Query 41850 CGAAAATCTGCA 41861 |||||||||||| Sbjct 1420 CGAAAATCTGCA 1409 >seq9 Length=54263 Score = 104 bits (114), Expect = 2e-17 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || || || || |||| |||||||||||||||||||| || || ||||| ||| Sbjct 1293 TAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGG 1352 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCT 41805 || | ||| | || |||||||||| ||| || ||| ||| | | | ||||||| Sbjct 1353 TCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATAGTGTCGGA 1411 Query 41806 CGACTCCACCTCCACCGTTATCGTTTTACCCGTCAG 41841 ||||||||||| | || || || ||||||||||| Sbjct 1412 AGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAG 1447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301954304800