Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001600275.1_202016 -03-01] 75 sequences; 18,637,344 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq8 113 4e-20 seq14 96.9 3e-15 >seq8 Length=655998 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| || | || | ||| |||||||| || ||||| ||||| | | Sbjct 643662 CCACCACGCAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 643721 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| ||||||||| | ||||| | ||||||||| ||| Sbjct 643722 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGGGGGG 643781 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | | | || || | ||| Sbjct 643782 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATGGTGTCCGAAGACTCGACC 643841 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||||||||| || | || |||||||| || ||||| Sbjct 643842 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 643888 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||||| |||||||| |||||||| || ||||| ||||| | | Sbjct 643434 CCACCGCGCAGACGGAGCACCAAGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 643493 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||| ||||| ||||||||| | || | | ||||||||| ||| Sbjct 643494 AGCGTACGTCCGTCCTCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGG 643553 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || | | ||| || || | ||| Sbjct 643554 ATTCCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCGGAAGACTCAACC 643613 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||||||||||| || | || || || || || ||||| Sbjct 643614 TCGAGCGTAATGGTCTTGCCCGTGAGGGTCTTTACGAAGATCTGCAT 643660 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| | ||||| || ||||||| ||||| || || Sbjct 643008 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCG 643067 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | ||||||||| || | || |||||||| ||||||| || Sbjct 643068 GCAAAGATCAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTTGACTTT 643127 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | || || | |||| ||||| ||||| ||||||||||| | || Sbjct 643128 ACGTTGTCAATGGTGTCGGACGACTCCACTTCCAAAGTAATTGTCTTGCCGGTCAGAGTC 643187 Query 21159 TTGACAAATATTTGCATT 21176 |||||||| || |||||| Sbjct 643188 TTGACAAAGATCTGCATT 643205 Score = 82.4 bits (90), Expect = 6e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 21000 TAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGG 21059 ||||| | ||||| || ||||||| ||||| ||||| || | || || | ||||||| Sbjct 643987 TAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG 644046 Query 21060 TCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCG 21119 || ||| | ||| |||||||| |||||| || || | | ||| ||| || | Sbjct 644047 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCCGAG 644106 Query 21120 GGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 | ||| || | ||| |||||||||||||| | || || || || || ||||| ||| Sbjct 644107 GACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATCTTG 644166 >seq14 Length=488268 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| || | || | || |||||||| || ||||| ||||||| Sbjct 51582 CCACCACGCAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 51523 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| || | || || | ||||||||| ||| Sbjct 51522 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 51463 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | | | || || || ||| Sbjct 51462 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACC 51403 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCA 21174 || | ||| ||||||||||| || | || ||||| || || |||| Sbjct 51402 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCA 51357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258814028700