Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001600275.1_202016 -03-01] 75 sequences; 18,637,344 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq8 122 1e-22 seq14 105 8e-18 >seq8 Length=655998 Score = 122 bits (134), Expect = 1e-22 Identities = 161/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| ||||| || |||||| || || ||||| || | ||| || || | Sbjct 643445 ACGGAGCACCAAGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGTCC 643504 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || || || || | ||||||||||| | || | | |||||| Sbjct 643505 GTCCTCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGGATTCCCTCCTT 643564 Query 43088 GTCCATGATTTTTTGT-TTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 43145 |||| ||| | || | |||| ||| | | | ||||||| || || || |||| ||| Sbjct 643565 GTCC-TGAATCTTGCTCTTGA-CGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGCGTA 643622 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| |||||||| || |||||||| ||||| ||||| Sbjct 643623 ATGGTCTTGCCCGTGAGGGTCTTTACGAAGATCTGCAT 643660 Score = 109 bits (120), Expect = 6e-19 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| || || || Sbjct 643013 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAA 643072 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||||| ||| | | |||||||||| ||| ||| || | ||| Sbjct 643073 GATCAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTTGACTTTA-CGT 643131 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| ||| ||||| || | || || || ||||| || || ||||| | Sbjct 643132 TGTCAATGGTGTCGGACGACTCCACTTCCAAAGTAATTGTCTTGCCGGTCAGAGTCTTGA 643191 Query 43171 CAAAGATTTGCATT 43184 ||||||| |||||| Sbjct 643192 CAAAGATCTGCATT 643205 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | ||| || || | || || |||||||| || || || Sbjct 643697 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAA 643756 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||||| || | || |||||||||| ||| || |||| ||| Sbjct 643757 GATAAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 643815 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || |||| |||||||| ||||| || || ||||| | Sbjct 643816 TGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGA 643875 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 643876 CAAAGATCTGCAT 643888 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 43006 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 43065 |||| || | || || || |||| || |||||||| || ||||| ||||| ||||||| Sbjct 643985 TGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT 644044 Query 43066 GGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCG 43124 |||||| || | || |||||||||| ||| || |||| ||| | | | ||||| Sbjct 644045 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATAGTGTCC 644103 Query 43125 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || |||| |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 644104 GAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATC 644163 Query 43185 TT 43186 || Sbjct 644164 TT 644165 >seq14 Length=488268 Score = 105 bits (116), Expect = 8e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 51547 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 51488 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || |||| ||| Sbjct 51487 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 51429 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || || | |||||||| |||||||| || ||||| | Sbjct 51428 TGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 51369 Query 43171 CAAAGATTTGCA 43182 | || || |||| Sbjct 51368 CGAAAATCTGCA 51357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817063921000