Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001600275.1_202016 -03-01] 75 sequences; 18,637,344 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq24 114 2e-20 seq21 105 8e-18 >seq24 Length=328028 Score = 114 bits (126), Expect = 2e-20 Identities = 541/856 (63%), Gaps = 10/856 (1%) Strand=Plus/Plus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 || ||||| | | ||| || ||||| | || || || ||||| ||||| || || ||| Sbjct 322685 GGGCACATGAGTGTCCAGTCACCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGGATC 322744 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353 || ||||| || || || | | | ||||| || || ||||| | || Sbjct 322745 CAGAGAGCGTAGAAGAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTCCTCAGG 322804 Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413 || ||||| | | | || | ||||| || || | || ||||| | | || || Sbjct 322805 TCAAGGAAGTCAAAGACGTCGGCGTGCCATGGCTCGAGATAGATGGCAAACGCACCGGGG 322864 Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473 || ||||| || ||||| || | ||| | || || | || | | | ||| || Sbjct 322865 CGCTTGTTACCACCCTGGTCGACGTAACGCGCAGTCGCGTCGTAGGCACGGAGCATGGGG 322924 Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533 | |||||||| || ||| ||||| || || || || || ||||||| || || Sbjct 322925 ACGATACCGTTGGAGTAACCGTTGGTTCCCGAAATGTACGAGCCCTTGGCACGGATGTTG 322984 Query 63534 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63593 || ||||| || || || || | |||||||| ||||| || | ||| Sbjct 322985 TGGATGTGGAGACCGATACCTCCGGCAGTCTTAGAGATCTGCGCGCAGGTCTTGAGGGTG 323044 Query 63594 TCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63653 || ||||| || || || || || ||||| | || || || |||||| || Sbjct 323045 TCGTAGATACCGTCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCAAGAAGACATCTGC 323104 Query 63654 TGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63713 | | ||| || || || || | |||||| |||||||| || || | || || Sbjct 323105 GCATTGGGAGTGCCAGCGTTGAAGAGGGTAGGCGAAGCGTGGGTGAAATAGCGCTCCGAC 323164 Query 63714 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGAC 63772 | || ||||| ||||| | | || || | || | || || || || ||||| Sbjct 323165 ATGAGGTTGTAGGTCTCGAGGACGCGCTCGATGTTGTCACCG-TGGATACCAACAGCGAC 323223 Query 63773 ACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGA 63832 |||||| | ||||||||| || | ||| | || ||| ||| || || | ||| || Sbjct 323224 ACGCATGATCATGTGCTGGGGACGCTCAGCGATCTTGCCGTTGATGCGCAGGAGGTACGA 323283 Query 63833 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63892 |||| ||| || || ||||| |||||||| | |||||| || ||||| ||||| | Sbjct 323284 GCGCTCCAGAGTCTTGAAGCCAAAGTAGTTGTAGGCAAAGTCGCGGTCGTAGATAATGGC 323343 Query 63893 CGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACT----TGAAATAA 63948 ||| | ||||| |||||| | || | || | | | ||| || || || | Sbjct 323344 CGAGTCGAGCTCATCCTTGTGCTTCATGACAA----CCTCGTACACCTCGTCCGAGATCA 323399 Query 63949 TCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 64008 | || | | | || || | || || || || ||||| | | || | | || | Sbjct 323400 TAGGGGCACGCTTTCCTGTCTTGGGGTTGACCCAGTTGTACAGGTCGGCGACGACCTGCG 323459 Query 64009 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGG 64068 || | || || || |||||||| || || || ||||| || | ||||| ||||| | Sbjct 323460 AGAAGACCTTCTTGGTCTCCTTGTGGAGGTTGGAGATGGCAATACGAGCGGCGAGAATAG 323519 Query 64069 CATAATCCGGATGTTG 64084 |||||||||| || || Sbjct 323520 CATAATCCGGGTGCTG 323535 >seq21 Length=344871 Score = 105 bits (116), Expect = 8e-18 Identities = 176/252 (70%), Gaps = 3/252 (1%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||| || |||||||| | || | ||||| || || ||||| Sbjct 104553 CAGGCAAAGTCGGTGTGGAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGG 104612 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| ||||| ||||| || ||||| || || || || || || || || |||||| Sbjct 104613 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAG 104672 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCT--GTCATGT 33758 || || || || || |||||||||||||| | ||| || | || | | ||| Sbjct 104673 ATGCCCTCGACGGCTGCAAAGGCAATAAGGCGCTCGGCAAAGGACGACTTTTCGTCCGTG 104732 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 ||||| | ||||| ||||||||||| || | || || || || || || || | Sbjct 104733 ATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATCGCCTGG 104792 Query 33819 AAGAGATAGTTT 33830 ||||| |||||| Sbjct 104793 AAGAGGTAGTTT 104804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817009546000