Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001600275.1_202016 -03-01] 75 sequences; 18,637,344 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq21 93.3 9e-14 seq5 84.2 5e-11 >seq21 Length=344871 Score = 93.3 bits (102), Expect = 9e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| || ||||||||| | | |||||| | ||||||||||| || || |||||||| | Sbjct 104441 GCTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGTCT 104382 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 || ||||||| || | || || | | ||||| | ||||| || | ||||||||| Sbjct 104381 CCTCGTCGCGCTCGGCAACGAAAAGATCTGGAACTCTACAAACCCATTCGACTTTATGGA 104322 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716 | | || ||||| || || || | ||||| ||||| Sbjct 104321 GATGATCTCGCTCCAGGGCAAGGCCAACTTTTTCGA 104286 >seq5 Length=1020404 Score = 84.2 bits (92), Expect = 5e-11 Identities = 137/194 (71%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 333319 TGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGAT 333378 |||| ||||||| |||||||| | || |||||| ||| ||| |||| || || | Sbjct 896795 TGTCCTCACCGGTCTGGTAACGCCAGAGCATGTACTGGAGGGGAGTCTTGTCGAGGTGGT 896854 Query 333379 CCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAA-GACGCATATTTGGATGCTTC 333437 ||||||||||||||||| ||||| || |||||| ||| ||| | || || |||||| Sbjct 896855 GGTCGATGTGGTGGAAAGCGTGCTGGGCAACGTAACCAATGAC-AAGGTTAGGGTGCTTC 896913 Query 333438 CAAACACTTCCG---TTGGTGGCTTCCATTTGCCCCGTGAGCACCTTAATGAGAGTGCTT 333494 || || ||||| ||| ||| || | | || || || | ||| | |||||| Sbjct 896914 CAGACGGTTCCGCCCTTGTTGGGCTCGGTCTCGCCAGTAAGGAGCTTGACGAGAGTAGAC 896973 Query 333495 TTTCCCGCACCATT 333508 ||||| | ||| || Sbjct 896974 TTTCCGGAACCGTT 896987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878940201250