Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001600275.1_202016 -03-01] 75 sequences; 18,637,344 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq24 181 1e-40 seq21 122 1e-22 >seq24 Length=328028 Score = 181 bits (200), Expect = 1e-40 Identities = 538/818 (66%), Gaps = 25/818 (3%) Strand=Plus/Plus Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339 |||||| | ||| || || || | |||||| ||| || || || | | || ||||| Sbjct 322438 GTACTCGATAATCTCAGTGCACAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTT 322497 Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399 ||| |||| |||||||||||||| ||| |||| || ||||| ||||| | Sbjct 322498 GGACTTGGAGTTGGCGGCATCCTTGTAGAGGATGAAGGGACCACCAGTCTCGGTCTGGGC 322557 Query 111400 TTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGG--CCCGTCCCT- 111455 | ||| || | ||| | | || ||| || | |||| ||| ||| | || Sbjct 322558 CTCGAGGATGGAGAACCACAGCTTCTGCGCCTTG----ATGGTCTTGCGACCCTTGCCAG 322613 Query 111456 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 111515 || |||||| | ||| || |||||||||||| |||||| ||| || | Sbjct 322614 CCTTCTCGTAGCTCTCGTACAGCTTCTCAAACTCCTCAGAGTGGACGTCGGCGAGGCCGG 322673 Query 111516 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAA 111575 | || | | || || | || | ||| | ||| | | ||| || ||||||||||| | Sbjct 322674 GGCACTCGGCGGGGCACATGAGTGTCCAGTCACCGTCCTGCTCGACACGCTTCATGAAGA 322733 Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGG 111634 |||| || ||||| || | | ||||| || | ||| || |||| || | || ||| Sbjct 322734 GGTCGGGGATCCAGAGAGCGTAGAAGAGGTCACGGGCACGGA-CCTCCTCCTTGCCGTGG 322792 Query 111635 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 111694 || | | |||||||| || | || || |||||||||||||| ||||||| || Sbjct 322793 TTCTTCCTCAGGTCAAGGAAGTCAAAGACGTCGGCGTGCCATGGCTCGAGATAGATGGCA 322852 Query 111695 ATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAAT 111748 | | || | ||| ||| | || | || || ||||| || |||| | Sbjct 322853 AACGCACCGG---GGCGCTTGTTACCACCCTGGTCGACGTAACGCGCAGTCGCGTCGTAG 322909 Query 111749 ACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT--ACGAGATT 111806 | || ||||| || | ||||| | || | ||| || || ||| ||| ||||| Sbjct 322910 GCACGGAGCATGGGGACGATACCGTTGGAGTAACCGTTGGTTCCCGAAATGTACGAGCCC 322969 Query 111807 TATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCG 111866 | |||| | | | |||||||| | || ||||| || || ||| ||||| |||| Sbjct 322970 T--TGGCACGGATGTTGTGGATGTGGAGACCGATACCTCCGGCAGTCTTAGAGATCTGCG 323027 Query 111867 CACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGA 111926 | || | | || || | |||||||||| || ||||| ||||| |||||| |||| Sbjct 323028 CGCAGGTCTTGAGGGTGTCGTAGATACCGTCAATCGAGTCGTCCTTCATGGCGACGAGGA 323087 Query 111927 AGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAA 111986 ||||| |||||||||| | || || ||||| ||||||||||| || | ||||| Sbjct 323088 AGCAAGAAGACATCTGCGCATTGGGAGTGCCAGCGTTGAAGAGGGTAGGCGAAGCGTGGG 323147 Query 111987 TGAACATA-CCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCG 112045 |||| ||| | | ||||| || ||| ||||| | ||| || |||| || ||| Sbjct 323148 TGAA-ATAGCGCTCCGACATGAGGTTGTAGGTCTCGAGGACGCGCTCGATGTTGTCACCG 323206 Query 112046 TGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||||| || | ||||| ||||||| ||||| ||| || Sbjct 323207 TGGATACCAACAGCGACACGCATGATCATGTGCTGGGG 323244 >seq21 Length=344871 Score = 122 bits (134), Expect = 1e-22 Identities = 300/446 (67%), Gaps = 12/446 (3%) Strand=Plus/Plus Query 122380 ACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 122439 || ||| ||| || ||||||| ||| || | || || | ||||||||||| ||| Sbjct 104277 ACGCGCGACTCGAAAAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATAAAGTCGAAT 104336 Query 122440 GGATTCTTCGCGTTCCAAATGGGTG-GCACCCCAACTTGTTTGAGGAGACGATCCGACAC 122498 || || | | |||||| || | | || | | | ||||||||| || | || Sbjct 104337 GGGTTTGTAGAGTTCCAGATCTTTTCGTTGCCGAGCGCGAC-GAGGAGACGGTCGGCGAC 104395 Query 122499 ATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG-GTTACATGGGAGTG 122557 | |||| ||||||| | |||| || | |||||| |||||||| | || ||||| | Sbjct 104396 AAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGCGAGACG-GGGAGGG 104454 Query 122558 CGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATAGTTT 122617 |||| || |||| ||| |||||||| || ||||| || | || | ||| || | Sbjct 104455 CGTCGGTGAGGAACTCTTGCTCAATCTTGACGGCCTCCTTGATAATCTTGGCGATCGTGT 104514 Query 122618 C-GGTAGTGGGTCTATTACGCA--AAGT-CTTGAAGAGCTCCACGGCAAACTCCTGGTGG 122673 | || ||||| ||| | || | |||||| |||||| || |||| Sbjct 104515 CCGGGTGTGGGCGG----CGCTGGAGGTGCGAGAAGAGGAGGCAGGCAAAGTCGGTGTGG 104570 Query 122674 AGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGC 122733 || ||||| || || || || || || || |||||| || || |||||||| || ||| Sbjct 104571 AGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCGCGC 104630 Query 122734 TTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCA 122793 ||||| | ||| | || | | || || || ||||||||||| ||||| || ||| Sbjct 104631 TTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAGATGCCCTCGACGGCTGCA 104690 Query 122794 AACGCAAAAAGGCGTTCGGCGAAGGA 122819 || |||| |||||| ||||| ||||| Sbjct 104691 AAGGCAATAAGGCGCTCGGCAAAGGA 104716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031411220000