Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001600275.1_202016 -03-01] 75 sequences; 18,637,344 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq14 224 3e-53 seq8 114 4e-20 >seq14 Length=488268 Score = 224 bits (248), Expect = 3e-53 Identities = 618/942 (66%), Gaps = 20/942 (2%) Strand=Plus/Plus Query 349213 TTTAGGT-ACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTG 349271 |||||| || ||||| || ||||| || |||||||| ||||| || || || || || | Sbjct 196849 TTTAGGGCACCACTTACTCGTGTGTCGCCGTTTGGCAGAATGACCGCGTTGAGATCATCG 196908 Query 349272 CAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTA 349331 | || || || |||||| | || || || || ||||| || || ||||| | ||||| Sbjct 196909 CCAACGACCAGGGTAACCGCACTACCCCCTCCTACGTCGCTTTCACCGACTCGGAGCGCC 196968 Query 349332 TGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATG 349391 | || |||||| |||| || || || | || || || | || || || || || | Sbjct 196969 TTATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAACCCTTACAACACCGTCTTCGACG 197028 Query 349392 CTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATCTGATCTAAAA 349447 | ||||| |||||||| | | || |||||| | || || || || | || Sbjct 197029 CCAAGCGTCTTATTGGCCGCAAGTTCTCTGACGCCGAGGTC----CAGTCGGACATGAAG 197084 Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATA---AACCAATTATTGAGGTTGAA 349504 || | || || | || || ||| |||| | | || ||||| |||| || Sbjct 197085 CACTGGCCCTTCAAGGTCATT------GACCGTGACACCAAGCCTATTATCCAGGTCGAG 197138 Query 349505 TATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAA 349564 || || || || || || | ||||| || || || || ||||| | || Sbjct 197139 TACCGCGGCGAGCAGAAGACTTTCTCGCCCGAGGAGATCTCGTCCATGGTCCTCACCAAG 197198 Query 349565 ATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTA 349624 |||||||| | || || || || | |||| ||| || | | || || || ||||| Sbjct 197199 ATGAAGGAGACCGCCGAGGCTTACCTCGGTGGAACCGTCTCCAAGGCCGTCATCACTGTC 197258 Query 349625 CCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGG 349684 || ||||| || || || | |||||| || || || || || || | |||| | || Sbjct 197259 CCCGCCTACTTCAACGACTCTCAGCGTCAGGCGACCAAGGACGCCGGTACCATTTCCGGC 197318 Query 349685 TTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGAT 349744 | | || || | || || || || ||||||||||| || ||||| || || || || Sbjct 197319 CTCGAGGTCCTTCGTATTATCAACGAGCCCACTGCTGCGGCCATTGCCTACGGTCTCGAC 197378 Query 349745 AAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGAT 349804 || | ||| || || || || | || || || || | ||||||||||| |||||| Sbjct 197379 AAGAAGAGCGAGGGCGAGAAGAACGTCCTCATCTTCGACCTTGGTGGTGGTACCTTTGAT 197438 Query 349805 GTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACA 349864 || || || || || | || ||||| || || || || || || ||||| ||||| || Sbjct 197439 GTCTCTCTTCTTACCATCGAGGAGGGCATCTTCGAGGTCAAGGCCACTGCCGGTGACACC 197498 Query 349865 CATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAG 349924 || |||||||| || || ||||| || |||||||| || |||||| | || || ||| Sbjct 197499 CACCTTGGTGGTGAGGACTTTGACAACCGTCTCGTCAACCACTTTGTTCAGGAGTTCAAG 197558 Query 349925 CGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGC 349983 || |||| || | || || | || | | || | ||||| || | || || Sbjct 197559 CG-CAAGAACAAGAAGGACATCACCGGCAACGCCCGTGCCCTCCGTCGTCTCCGCACCGC 197617 Query 349984 GTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTC 350043 ||||| ||||| ||||| || | || || | | || ||| ||||||| || || || Sbjct 197618 CTGTGAGCGTGCCAAGCGCACCCTCTCGTCGGCCGCACAGACCACTATTGAGATCGACTC 197677 Query 350044 TCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATG 350103 || ||| |||| || |||| | || || || ||||| || || || || | || Sbjct 197678 GCTCTTTGACGGCATCGACTTCTACACCTCCATCACCCGTGCCCGTTTCGAGGAGCTCTG 197737 Query 350104 TATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGT 350145 ||| || || | | || ||||| || || || || || Sbjct 197738 CCAGGACCTCTTCCGCTCCACCATGGAGCCCGTAGAGAAGGT 197779 Score = 104 bits (114), Expect = 7e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||||| || || || || || || Sbjct 51586 CATACCACCACGCAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 51527 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || ||||| ||||| ||||| || || Sbjct 51526 CGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGG 51467 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || || || ||||| | || || | || Sbjct 51466 GGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAGGACTC 51407 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCA 140736 || ||||| || | ||||| || || || || || || |||||||||| Sbjct 51406 GACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCA 51357 >seq8 Length=655998 Score = 114 bits (126), Expect = 4e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || |||||||| ||||| || || || || || || Sbjct 643658 CATACCACCACGCAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTC 643717 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || || |||||||| || || ||||| || || Sbjct 643718 GGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGG 643777 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 || || || || || ||||| || || ||| || || || ||||| | || || | | Sbjct 643778 GGGGATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCAATGGTGTCCGAAGACT 643836 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || | ||||| || || || || || ||||| |||||||| Sbjct 643837 CGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 643888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515252943935225