Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001600275.1_202016 -03-01] 75 sequences; 18,637,344 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq8 104 1e-17 seq14 84.2 1e-11 >seq8 Length=655998 Score = 104 bits (114), Expect = 1e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || |||||| || ||||| || || || || || || |||| || || || Sbjct 643002 TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGC 643061 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || |||||||| || | |||||| ||||| ||||| | ||||||||||| |||| || Sbjct 643062 TTTCCGGCAAAGATCAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATC-TT 643120 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| | ||| ||||| ||||||||||| || || || || ||||| Sbjct 643121 TGACTTTACGTTGTCAATGGTGTCGGACGACTCCACTTCCAAAGTAATTGTCTTGCCGGT 643180 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || || ||||| |||||||| Sbjct 643181 CAGAGTCTTGACAAAGATCTGCAT 643204 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | ||||| ||||| || |||||| || ||||| || || Sbjct 642749 GCCGCCACGGAGACGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 642808 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || ||||||| || || || || || || || | ||||| ||||| || || Sbjct 642809 GAGCGTGCGGCCGTCTTCGAGCTGCTTGCCTGCGAAAATGAGGCGCTGCTGGTCGGGAGG 642868 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || || | ||| ||||| | ||| | Sbjct 642869 GATACCCTCCTTGTCCTGGATC-TTGGACTTGACATTGTCAATGGTGTCAGAGGACTCGA 642927 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| ||| ||||| || ||||| || || || || || |||||||| Sbjct 642928 CTTCCAGGGTGATCGTCTTCCCGGTCAAGGTCTTGACGAAGATCTGCAT 642976 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| || | ||||| ||| |||||| || ||||| || || ||||| || || Sbjct 643215 AGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGG 643274 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || ||||| || || | |||||||||||| || || | |||||| Sbjct 643275 CCATCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGGGGGATACCCTCC 643334 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 643335 TTGTCCTGGATCTT 643348 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || | ||| |||||| || ||||| || || || || || || Sbjct 643443 AGACGGAGCACCAAGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGT 643502 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || || ||||| || || ||||| ||||| || || | ||||||| Sbjct 643503 CCGTCCTCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGGATTCCCTCC 643562 Query 34609 TTGTC 34613 ||||| Sbjct 643563 TTGTC 643567 >seq14 Length=488268 Score = 84.2 bits (92), Expect = 1e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || |||||| || ||||| || || ||||| || || |||| || || || Sbjct 51558 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGC 51499 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | |||||| ||||| || || | ||||||||||| |||| || Sbjct 51498 TTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATC-TT 51440 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | ||| ||||| | ||| || || | ||| || || || || || Sbjct 51439 GGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 51380 Query 34683 TAACGTTTTCACAAAAATCTGCA 34705 | || || || |||||||||| Sbjct 51379 GAGGGTCTTGACGAAAATCTGCA 51357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729312317475