Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001600275.1_202016 -03-01] 75 sequences; 18,637,344 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq14 147 5e-30 seq8 138 3e-27 seq16 127 5e-24 >seq14 Length=488268 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || |||||||| ||||| || ||| ||| Sbjct 51359 CAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGAC 51418 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 51419 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 51478 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || ||| | || || ||| || Sbjct 51479 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATC 51538 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 51539 CAGAAGGAGTCGACCCTCCACCTCGT 51564 >seq8 Length=655998 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || || || |||||||| || || ||| Sbjct 643429 CAGATCTTCGTCAAGACTCTTACCGGGAAGACCATTACTCTCGAGGTCGAGTCGTCCGAC 643370 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || ||||| || ||||| || Sbjct 643369 ACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAACAG 643310 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||| |||||||| ||||| | |||||| |||| || ||| || Sbjct 643309 CGTCTCATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACTCTTTCCGACTACAACATC 643250 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 643249 CAGAAGGAGTCCACCCTCCACCTCGT 643224 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || |||||||||||||| || || ||| Sbjct 643885 CAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGTCTTCGGAC 643826 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 643825 ACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 643766 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || |||||||| ||||| | || || |||| || ||| || Sbjct 643765 CGCCTTATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATC 643706 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 643705 CAGAAGGAGTCGACTCTTCACCTCGT 643680 Score = 136 bits (150), Expect = 1e-26 Identities = 134/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || |||||||||||||| || ||| ||| Sbjct 644159 CAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGAC 644100 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 644099 ACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 644040 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || || ||||||||||| || |||||||| || || | || || |||| || Sbjct 644039 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTA 643987 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || || || |||||||| || || ||| Sbjct 643657 CAGATCTTCGTAAAGACCCTCACGGGCAAGACCATTACGCTCGAGGTTGAGTCTTCCGAC 643598 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || |||||||| || |||||||| Sbjct 643597 ACGATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCTGACCAGCAG 643538 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || |||||||| || ||| | || || |||| || ||| || Sbjct 643537 CGCTTGATCTTTGCGGGCAAGCAGCTCGAGGACGGACGTACGCTGTCCGACTACAACATC 643478 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || |||| |||| Sbjct 643477 CAGAAGGAGTCGACTTTGCA-CTTG 643454 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || ||||||||||| || || || ||| ||| Sbjct 642973 CAGATCTTCGTCAAGACCTTGACCGGGAAGACGATCACCCTGGAAGTCGAGTCCTCTGAC 642914 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||| |||||||| || || |||||||| |||||||| Sbjct 642913 ACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAG 642854 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||||||||||| || | || || ||| || ||| || Sbjct 642853 CGCCTCATTTTCGCAGGCAAGCAGCTCGAAGACGGCCGCACGCTCAGCGACTACAACATC 642794 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 642793 CAGAAGGAGTCGACCCTCCACCTGGT 642768 >seq16 Length=462251 Score = 127 bits (140), Expect = 5e-24 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || || ||||||||||||||||| || ||||| ||||| |||||||| Sbjct 312742 CTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACTATCGACAACGTCAAG 312683 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || |||||||||||||| Sbjct 312682 TCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGTCTTATCTTCGCCGGC 312623 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || |||||||| || || | |||||| | || || Sbjct 312622 AAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTA 312588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730043289550