Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 100 6e-16 seq4 86.0 1e-11 >seq1 Length=5253760 Score = 100 bits (110), Expect = 6e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 230395 GAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGG 230453 || || || || | ||| |||||||| | || || |||| ||| | ||||| || Sbjct 4412849 GAGGCCGTCGAGATCGAGCAGGAGTTCCTCACCGAGGCCCTTCCC-GTCTCGCTTATCGG 4412907 Query 230454 CATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGC 230513 ||||||||| | || ||| | ||||||||||| ||||| ||||||||| | | || || Sbjct 4412908 CATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGC 4412967 Query 230514 ACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTC 230573 || || || || | | ||||| | |||||||| | || |||||| | || || Sbjct 4412968 CCTCGGCAACCCCAAGATCTGGAACTCGACCAACCCCTTCGACTTCATGGAGATGATCTC 4413027 Query 230574 GCTTCAAGGGAAGACCAACTTCTTCGA 230600 ||| || || ||| ||||||||||||| Sbjct 4413028 GCTCCAGGGCAAGGCCAACTTCTTCGA 4413054 >seq4 Length=2250194 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/159 (72%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 230470 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAA 230529 ||| | || ||||| || ||||| || ||||| | | || || || || ||||| || Sbjct 1041270 ATGTGCCAATACATGGAGTTCGTGGCGGACCGTCTGATCGTCGCCCTCGGCTACGACAAG 1041211 Query 230530 GTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACC 230589 ||||| || | | |||||| || | | ||||||||||| || || || ||| || Sbjct 1041210 ATGTACCACGCCACGAACCCATTCGACTGGATGGAGCTCATCAGCCTGCAGGGCAAGGCC 1041151 Query 230590 AACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA-GGCC 230627 ||||| ||||| ||||||||||| ||||||| |||| Sbjct 1041150 AACTTTTTCGAGTCGCGTGTCAGTGCGTATCAGATGGCC 1041112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823783146080