Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq6 109 5e-19 seq3 95.1 1e-14 >seq6 Length=960230 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | ||||| || |||||||| |||||||| ||||||| | Sbjct 925234 CCGCCACGGAGACGGAGCACGAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCCGAC 925293 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||||||||| ||||| || ||||||| | ||||||||| || Sbjct 925294 AGCGTACGCCCGTCCTCCAGCTGCTTGCCGGCGAAAATAAGGCGCTGCTGGTCGGGAGGG 925353 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | | | || ||| || ||| Sbjct 925354 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATCGTGTCAGAGGACTCGACC 925413 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | |||||||||||||| || Sbjct 925414 TCGAGCGTAATGGTCTTGCCAGT 925436 Score = 89.7 bits (98), Expect = 4e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 |||||||||||| |||||||| ||||| | || || | ||||||| ||||| ||||| Sbjct 925769 AGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCGAGCTGCTTGCC 925828 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 || | ||||| | ||||||||| || | ||| |||||||| ||||| || Sbjct 925829 GGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTT 925888 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 || | | ||| ||| || || ||| || | ||| |||||||||||||| Sbjct 925889 GACGTTGTCGATAGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 925942 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| |||||||| ||||| | || || | ||||||| ||||| ||||| Sbjct 925542 GTAGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCAAGCTGCTTGCCA 925601 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | ||||||||| || | ||| |||||||| |||||| || Sbjct 925602 GCAAAGATGAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTG 925661 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| || | ||| || ||||||||||| | || Sbjct 925662 ACGTTGTCGATCGTGTCTGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAGAGTC 925721 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 925722 TTGACGAAGATCTGCAT 925738 >seq3 Length=2509747 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||||| ||||| || ||||||| ||||| ||||| Sbjct 987469 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 987410 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | ||| |||||||| |||||| || Sbjct 987409 GCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 987350 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || ||| || | || ||||||||||| || | || Sbjct 987349 ACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTGAGGGTC 987290 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 987289 TTGACGAAAATCTGCAT 987273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259117659456