Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 376 3e-99 seq3 156 4e-33 seq6 136 4e-27 seq2 134 1e-26 seq4 132 5e-26 seq7 127 2e-24 >seq1 Length=5253760 Score = 376 bits (416), Expect = 3e-99 Identities = 570/802 (71%), Gaps = 13/802 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||||| |||||||||| ||||||| | |||| Sbjct 4412231 ATCTGGCAGATGTACAAGAAGGCGCAGGCGTCCTTCTGGACCGCCGAGGAGATCAACCTC 4412290 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752 | ||| ||||||||| | | ||||||||||||||| | |||||| || Sbjct 4412291 GCGCCCGACCTCCACGACTGGGACAACAAGCTCAACGACAACGAGCGCTACTTCATCGAG 4412350 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 |||||||| ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct 4412351 CACGTGCTCGCCTTCTTCGCCGCGTCAGACGGCATCGTCAACGAGAACCTTGTCGAGCGC 4412410 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||| | |||||||| | |||||||||||| |||||| ||| Sbjct 4412411 TTCTGCGGTGAGGTCCAGATCGCCGAGGCCAAGACCTTCTACGGCTTCCAGATCATGATG 4412470 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCG---CTCTTCG 116929 |||||| | ||||| || | || || ||||||||||| ||| | || | | | Sbjct 4412471 GAGAACATCCACTCTGAGACCTACTCTCTTCTCATCGACACCTACATCCGTGACGGTGCC 4412530 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 | | | || | | | | || ||||| ||||| || || ||| |||| |||||||| Sbjct 4412531 C-GCCGCAACTACCTCT--TCAAGGCCATTGAGACCATCCCCTGCATCAAGAAGAAGGCC 4412587 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC-TTCGGCGAGCGCCTGGTGGC 117048 || |||||||||||||||||| | | | || || || | |||| ||||||||| | || Sbjct 4412588 GACTGGGCGCTGCGCTGGATCTCGGAC-GACAGCTCGTCGTTCGCCGAGCGCCTCATCGC 4412646 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||||| |||||||||||| ||||||| |||||| |||||| | || || |||||||| Sbjct 4412647 GTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCAA 4412706 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| |||||||| |||||||| || || ||| |||||||| || || | |||||||| Sbjct 4412707 GAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAACGAGCTTATTTCGCGCGACGAGGG 4412766 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC 117228 || || |||||| || || | || |||| || | | || || | ||| Sbjct 4412767 CCTCCACACCGACTTCGCATGCCTCCTCTTCACCCACCTCCGCCGCCGCCCCCACCCGGA 4412826 Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288 | | | ||||| || ||| || |||| ||||||||| ||||||||||| || Sbjct 4412827 CCTTATTGAGAAGATCATCCGCGAGGCCGTCGAGATCGAGCAGGAGTTCCTCACCGAGGC 4412886 Query 117289 GCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCG 117347 || || || || | || | || || || | |||| || ||||||||||||| Sbjct 4412887 CCTTCCCGTCTCGCTTATCGGCATGAA-CGCCAAGCTCATGTGCCAGTACATCGAGTTCG 4412945 Query 117348 TCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGC 117407 |||||||| | ||||| ||| || | | | ||||| || ||| || ||||||| Sbjct 4412946 TCGCCGACCGCCTGCTCGTCGCCCTCGGCAACCCCAAGATCTGGAACTCGACCAACCCCT 4413005 Query 117408 TGGACTTTATGAACCTCATCTC 117429 | ||||| ||| | | ||||| Sbjct 4413006 TCGACTTCATGGAGATGATCTC 4413027 >seq3 Length=2509747 Score = 156 bits (172), Expect = 4e-33 Identities = 162/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| |||||||| |||| ||||| || | Sbjct 987273 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 987332 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||||||| | ||||| Sbjct 987333 GACACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 987391 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 987392 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 987451 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 987452 CATCCAGAAGGAGTCGACCCTCCACCTCGT 987481 >seq6 Length=960230 Score = 136 bits (150), Expect = 4e-27 Identities = 145/189 (77%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 ||||| ||||| ||||||||| | || ||||| || | |||| | | |||| |||| Sbjct 925945 CTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACTATCGACAACG-TCAA 925887 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || |||| ||||| ||||||||||| | |||||||| || || |||| ||| || Sbjct 925886 GTCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTTATCTTCGCCGG 925827 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| |||||| ||| |||||||||||| ||||||||| |||| || Sbjct 925826 CAAGCAGCTCGAGGACGGGCGCACTCTCTCCGACTACAACATTCAGAAGGAGTCCACTCT 925767 Query 40890 GCATCTAGT 40898 || || || Sbjct 925766 CCACCTTGT 925758 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || |||||| | || ||||| | | Sbjct 925738 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACCCTTGAGGTCGAGTCGTCA 925679 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| |||||||| || | ||||| Sbjct 925678 GACACGATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCACCTGACCA 925620 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || ||||| ||||| || |||| |||||| ||| ||||||||| Sbjct 925619 GCAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGCACTCTCTCCGACTACAA 925560 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| ||||||||| | || || || || || |||| | | |||||| Sbjct 925559 CATTCAGAAGGAGTCTACCCTCCACCTCGTTCTGCGTCTCCGCGGCGGC 925511 Score = 114 bits (126), Expect = 1e-20 Identities = 141/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACA-GCGTGCAAACGCTCAA 40769 || || ||||| ||||| || |||| ||||| || | |||| | || |||| |||| Sbjct 925439 CTGACTGGCAAGACCATTACGCTCGAGGTCGAGTCCTCTGACACGATTGACAACG-TCAA 925381 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| ||||||||||| | |||||||| || || || | ||| || Sbjct 925380 GAGCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTTATTTTCGCCGG 925321 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| |||||||| |||| ||| || || ||||||||||| ||||||||| | ||| | Sbjct 925320 CAAGCAGCTGGAGGACGGGCGTACGCTGTCGGACTACAACATTCAGAAGGAGTCGACGTT 925261 Query 40890 GCATCTAGTG 40899 ||| || ||| Sbjct 925260 GCACCTCGTG 925251 >seq2 Length=4144821 Score = 134 bits (148), Expect = 1e-26 Identities = 185/258 (72%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 139378 GCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGA 139437 ||||||||||||||||||||||||||||||| ||| ||||||||| ||| | |||| Sbjct 546576 GCACGGCTTCCACGTGCACGAGTTCGGCGACCTCAGCGACGGGTGCATGTCCACAGGCGC 546635 Query 139438 GCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGAGATCAGGCACGTCGG 139497 ||||| |||||| | | || |||||||| || || | ||| | ||||||| || Sbjct 546636 GCACTACAACCCTTTCGGACACGATCACGGCGCCCCGTCCGACAAGAACCGGCACGTGGG 546695 Query 139498 CGACCTGGGCAACCTCGAGTCGGCGGGCCGCGACGCGCTCACCGAGGTGAGCCTGACGGA 139557 ||||| || ||| || | ||||| | |||| || || || | | | ||| Sbjct 546696 TGACCTCGGTAACATCAA---GGCGGACGCGGACGGCGTCGCCAAGATCGAAATCAAGGA 546752 Query 139558 CGGCGTCGTGTCCCTGTACGGTCCGCACAGCATCATCGGACGGAGTCTGGTCGTGCACAC 139617 | || ||||| ||||| ||| | ||||||| | || || || || | ||||||||| Sbjct 546753 CTGCCTCGTGCGCCTGTGCGGGCAGCACAGCGTAATTGGGCGTGGTGTCGTCGTGCACGA 546812 Query 139618 GGACAGGGACGATCTGGG 139635 || || |||||| ||||| Sbjct 546813 GGGCACGGACGACCTGGG 546830 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 139372 CGGCCTGCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGC 139431 ||||||||||||| | ||||| ||| ||||||||||| |||| | || |||| ||| | Sbjct 600220 CGGCCTGCACGGCATGCACGTACACCAGTTCGGCGACCTGAGCCAGGGATGCAACTCGAC 600279 Query 139432 CGGCGAGCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGAGATCAGGCA 139491 || | ||||| ||||| | |||| |||||||||| ||||| | | | | | || Sbjct 600280 GGGGGTGCACTGGAACCCGCTGAACCGGAACCACGGCGCACCCGAAGACCGCAACCGTCA 600339 Query 139492 CGTCGGCGACCTGGGCAACCTCGAG 139516 | | |||||| |||||||| | ||| Sbjct 600340 CATGGGCGACATGGGCAACTTTGAG 600364 >seq4 Length=2250194 Score = 132 bits (146), Expect = 5e-26 Identities = 167/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 116969 CCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC 117028 || ||| || | |||||||||| |||||||| | ||| | | | |||| |||| Sbjct 1041659 CCCTGCATCCGAAAGAAGGCCGACTGGGCGCTCAAGTATATCAC-GCCTGAGATGCCG-- 1041603 Query 117029 TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTC 117088 ||| || |||||| | || || || || |||||| ||||||| || || || Sbjct 1041602 TTCCGCACGCGCCTCATCGCATTTGCTTGTGTGGAGGGCATCTTCTTCTCTGGGTCATTT 1041543 Query 117089 GCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAG 117148 || || || || ||||||||||| ||||| || |||| ||||||||| |||||||||||| Sbjct 1041542 GCAGCAATCTTCTGGCTCAAGAAGCGCGGGCTGATGCGCGGCCTGACCTTCAGCAACGAG 1041483 Query 117149 CTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT 117195 |||||||| | || ||||| |||| ||||||||| ||| |||| Sbjct 1041482 CTCATCTCGCGTGATGAGGGCATGCACACCGACTTTGCATGTCTGCT 1041436 >seq7 Length=796062 Score = 127 bits (140), Expect = 2e-24 Identities = 137/179 (77%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||||||| |||| ||||| || || Sbjct 392195 ATGCAGATCTTCGTCAAGACTCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCC 392254 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| |||||||||||| | ||||| Sbjct 392255 GACACGATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 392313 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||| || ||||||| ||| ||||| ||||| || |||| |||||||| ||||||| Sbjct 392314 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 392372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219096956160