Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq6 145 7e-30 seq3 129 5e-25 seq7 118 9e-22 >seq6 Length=960230 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || || | ||||| |||||||| || ||||||||||| ||| Sbjct 925512 CCGCCGCGGAGACGCAGAACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAG 925571 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||||| ||||| ||||| || ||||| |||||||||||||||| || || || Sbjct 925572 AGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGTGGA 925631 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 |||||||||||||| || || || || | |||| ||||| | ||||||| Sbjct 925632 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGACGACTCGACC 925691 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | ||| | ||| |||||||||||||| || || || ||||||||| Sbjct 925692 TCAAGGGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATG 925739 Score = 132 bits (146), Expect = 4e-26 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || ||||||||||| ||| | ||||||| ||||||||||| Sbjct 925763 GTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCGAGCTG 925822 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| ||||||||||| |||||||| |||||||||||||| ||| || Sbjct 925823 CTTGCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTT 925882 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||||| | ||||||||| | ||| | || |||||||| Sbjct 925883 GGACTTGACGTTGTCGATAGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 925942 Query 118715 CAG 118717 || Sbjct 925943 GAG 925945 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || ||||||||||| || || || ||| ||||| Sbjct 925251 CACGAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTACGCCCGTCCTC 925310 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| | || || |||||||| |||||||| |||||||||||||| Sbjct 925311 CAGCTGCTTGCCGGCGAAAATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 925370 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | ||||| | | ||||||||||| || | || || Sbjct 925371 GATCTTGCTCTTGACGTTGTCAATCGTGTCAGAGGACTCGACCTCGAGCGTAATGGTCTT 925430 Query 118709 GCCGGTCAGA 118718 ||| |||||| Sbjct 925431 GCCAGTCAGA 925440 >seq3 Length=2509747 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| || | ||||| ||||||||||| Sbjct 987476 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTG 987417 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| ||||||| |||||||| ||||| || |||||||||||||| || || Sbjct 987416 CTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 987357 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||||| | ||||||||||| || | || ||||| || Sbjct 987356 CGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGT 987297 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||||||||| Sbjct 987296 GAGGGTCTTGACGAAAATCTGCAT 987273 >seq7 Length=796062 Score = 118 bits (130), Expect = 9e-22 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || || ||| |||||||||||||||| ||||| || |||||||||||| Sbjct 392349 TCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTG 392290 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| ||||| | | ||||||||||| ||| | Sbjct 392289 TCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATG 392230 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| |||||||| || || || |||||||| Sbjct 392229 GTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 392195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830315403072