Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 221 2e-52 seq2 138 2e-27 seq4 100 4e-16 >seq1 Length=5253760 Score = 221 bits (244), Expect = 2e-52 Identities = 562/846 (66%), Gaps = 33/846 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||| ||||| ||||| | ||| ||| || | || Sbjct 4412231 ATCTGGCAGATGTACAAGAAGGCGCAGGCGTCCTTCTGGACCGCCGAGGAGATCAACCTC 4412290 Query 125079 TCCAAGGACCTGTACGATTGGGAGA-CTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 | ||||| |||| ||||| | | | | || ||| ||||| | || || Sbjct 4412291 GCGCCCGACCTCCACGACTGGGACAACAAGCTCAACGACAAC-GAGCGCTACTTCATCGA 4412349 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACAC 125196 |||| | | |||||||| |||| || || || ||||||||||| || || || || | Sbjct 4412350 GCACGTGCTCGCCTTCTTCGCCGCGTCAGACGGCATCGTCAACGAGAACCTTGTCGAG-C 4412408 Query 125197 GATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 | |||| ||| | || | |||| | ||| ||||| ||||| ||||||| Sbjct 4412409 GCTTCTGCGGTGAGGTCCAGATCGCCGAGGCCAAGACCTTCTACGGCTTCCAGATCATGA 4412468 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA---TC 125313 | |||||| | ||||| || | |||||| || || |||| ||||| || || | Sbjct 4412469 TGGAGAACATCCACTCTGAGACCTACTCTCTTCTCATCGACACCTACATCCGTGACGGTG 4412528 Query 125314 CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 | | || || || ||||| || || || || || | || | || || |||| Sbjct 4412529 CCCGCCGCAACTAC---CTCTTCAAGGCCATTGAGACCATCCCCTGCATCAAGAAGAAGG 4412585 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 | | |||| | | || |||||| ||||||| || |||| |||||| | || | | Sbjct 4412586 CCGACTGGGCGCTGCGCTGGATCTCGGACGACAGCTCGTCGTTCGCCGAGCGCCTCATCG 4412645 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 | ||||| ||||| |||||||||||||| ||||| || || | ||||| ||||||| Sbjct 4412646 CGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCA 4412705 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 |||||||||| || |||||||| || || | |||||| |||| || || ||||||| Sbjct 4412706 AGAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAACGAGCTTATTTCGCGCGACGAGG 4412765 Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTC-CCGAGTGCAGA 125612 |||| ||| ||||| || || || || || | | || || | ||| || Sbjct 4412766 GCCTCCACACCGACTTCGCATGCCTCCTCTT---CACCCACCTCCGCCGCCGCCCCCA-- 4412820 Query 125613 TCCAGCGA------TGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAA 125666 || | || ||| ||| ||||| ||| ||||| ||| || || Sbjct 4412821 -CCCG-GACCTTATTGAGAAGATCATC---------CGCGAGGCCGTCGAGATCGAGCAG 4412869 Query 125667 GAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGC 125726 ||||| || ||||| |||| || ||| | || ||||||||| |||||| |||||| Sbjct 4412870 GAGTTCCTCACCGAGGCCCTTCCCGTCTCGCTTATCGGCATGAACGCCAAGCTCATGTGC 4412929 Query 125727 GAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTAC 125786 ||||||| ||||| || || || || || || || | || |||||| | Sbjct 4412930 CAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACCCCAAGATCTGG 4412989 Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846 ||| | | || ||||| || |||||| | || || || |||| ||| ||||||| Sbjct 4412990 AACTCGACCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTC 4413049 Query 125847 TTCGAG 125852 |||||| Sbjct 4413050 TTCGAG 4413055 >seq2 Length=4144821 Score = 138 bits (152), Expect = 2e-27 Identities = 339/502 (68%), Gaps = 14/502 (3%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| ||||| || || || ||||| | ||| ||||| | || || Sbjct 3048392 CGCTACGTTGACCAGGGTGGCAACAAGCGCCCCGGCGCCTTTGCCATCTACCTCGAGCCG 3048333 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| ||||| ||||| || | || | ||||| ||| ||| || ||| Sbjct 3048332 TGGCACGCCGACGTGTTTGATTTCCTTGACCTCCGCAAGAACCACGGCAAGGAGGAGATG 3048273 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA- 97042 || || | ||| | || || || |||||| | || || | ||||||||||||||| | Sbjct 3048272 CGCGCTCGTGACCTCTTCTACGCTCTCTGGATCCCGGACCTCTTCATGAAGCGCGTCGAG 3048213 Query 97043 --CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGAT-TG 97099 |||||| | |||||| ||| |||||||| | || ||||| || ||||| || Sbjct 3048212 TCCGACGGAG---ACTGGACCCTCATGTGCCCTGCTGAGTGCCCCGGCCTTGCCGATGTG 3048156 Query 97100 CTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGA 97158 | | || ||||| ||| ||| | || |||| |||||| | || | Sbjct 3048155 CACTCG-GAGGAGTTCGAGCAGCTCTACGAGAAGTATGAGCGTGAGGGCAAGGGCCGCAA 3048097 Query 97159 GACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGA 97217 ||||| || | || | |||| || ||| |||||| || ||| ||| |||||||| Sbjct 3048096 GACGA-TCAAGGCGC-AGAAGCTCTGGTTCGCCATCCTGGAGGCCCAGACTGAGACTGGC 3048039 Query 97218 ACTCCGTACATTCTCTACAAGGATACCGTGAA-TCGCAACAGCAACCAACGCCACTTGGG 97276 ||| | ||| ||||||||||| | | || ||| || ||||| | ||| | || Sbjct 3048038 GGTCCCTTCATGCTCTACAAGGACGCGGCCAACTCG-AAGTCGAACCAGCAGCACCTCGG 3047980 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGAC 97336 |||||||||| ||||| || ||||| || || | |||||| | ||||| || ||| Sbjct 3047979 CACCATCAAGTCGTCCAACCTCTGCACCGAGATCATCGAGTACTCGTCTCCCGATGAGGT 3047920 Query 97337 GGCAGTTTGCGTTCTGGCATCG 97358 || || ||| ||||| ||| Sbjct 3047919 TGCTGTGTGCAACCTGGCCTCG 3047898 >seq4 Length=2250194 Score = 100 bits (110), Expect = 4e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 125445 GTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGA 125504 || |||||||||||||| || || ||||| || ||||| ||||||||||||||||| Sbjct 1041572 GTGGAGGGCATCTTCTTCTCTGGGTCATTTGCAGCAATCTTCTGGCTCAAGAAGCGCGGG 1041513 Query 125505 CTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGT 125564 || |||| ||| ||||| ||| |||||| | || || || || |||||| | ||| Sbjct 1041512 CTGATGCGCGGCCTGACCTTCAGCAACGAGCTCATCTCGCGTGATGAGGGCATGCACACC 1041453 Query 125565 GACTTTGC 125572 |||||||| Sbjct 1041452 GACTTTGC 1041445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059051788160