Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 114 3e-20 seq1 100 6e-16 >seq2 Length=4144821 Score = 114 bits (126), Expect = 3e-20 Identities = 136/182 (75%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| |||| ||||| ||||| |||| |||| || || |||||| || || Sbjct 3175003 GGCCCCAACGGTTCGGGCAAGTCCACCCTCGTCAAGCTCCTCACCGGTGAGACCGAGCCC 3174944 Query 280239 A--CTGAGGGGT-CCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | || | || |||| |||||||| |||||| | || | |||||| || |||||| Sbjct 3174943 AACCTCGGCGGCACCGTGTGGAAGCACCCCAACCTCGTTATTGGTTACGTTGCCCAGCAC 3174884 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || ||||||||||| || ||||||| |||| |||||| | | ||||| | |||||| Sbjct 3174883 GCGTTCCACCACATTGACCACCACCTCGACAAGACTCCCCTCGAGTACATGCTCTGGCGC 3174824 Query 280356 TA 280357 || Sbjct 3174823 TA 3174822 Score = 105 bits (116), Expect = 1e-17 Identities = 388/603 (64%), Gaps = 10/603 (2%) Strand=Plus/Minus Query 218506 ATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAG 218565 || ||| || | ||||| || ||||||| ||||| || ||||| ||| | | Sbjct 2155630 ATTCCCATCTCGGACTTTGTCAACAAGGAACTCATCCTCTTCTCC----ATGGCGGACAA 2155575 Query 218566 CGTTCTAT---TCCCAGC-GTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTT 218621 | | | || ||||| | || | |||||| ||||| || ||||| ||| || | || Sbjct 2155574 CATACGATCGATCCCATCAGTTGCGGATGGTCTCAAACCGGGTCAGCGCAAGGTCATGTT 2155515 Query 218622 TGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGT 218681 | || ||||| || ||| ||||| ||||| | ||| | |||||| || Sbjct 2155514 CGGTTGCTTTAAGCGCAATCTGAAGGGCGAAATCAAGGTTGTTCAACTCGGTGGTTACGT 2155455 Query 218682 ATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCAT 218741 |||| | ||| | || || ||||| || |||||| || || ||||||| || | Sbjct 2155454 CGCCGAGAATTCGGCGTATCACCACGGCGAACAGAGTTTGACGGCGACCATTGTCGGTCT 2155395 Query 218742 GGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGG 218801 || ||| ||| ||| ||||| |||||||| || | || ||||||||||||||||| Sbjct 2155394 TGCGCAGAACTTTGTCGGCAGCAACAACATCAATCTTCTTGAGCCCAACGGTCAGTTTGG 2155335 Query 218802 TTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTC 218861 | |||| | || || ||||| || || | || || || || | || Sbjct 2155334 TACTCGCATGCAAGGCGGCAAGGACGCGGCAAGCGCGCGTTACATTTTCACCACCACATC 2155275 Query 218862 GCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGA 218921 | |||||||| |||||| | | | |||||| || || || || || ||| Sbjct 2155274 TGCGATGACGCGCGCTGTGTTCCACCCCGACGATGACCCACTTCTCAACTACCTCATGGA 2155215 Query 218922 CGATGGTTCTTCG-ATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAA 218980 || || | || |||||||| |||| || | ||| | | || | | ||| | | Sbjct 2155214 GGACGG-CCAGCGCATTGAGCCGGAGTACTACCTTCCTACCGTGCCCCTAGTCCTCATCA 2155156 Query 218981 ATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGG 219040 | || ||| | || || || || || | || || | ||||| ||||| ||| | Sbjct 2155155 ACGGGGCCGACGGCATTGGAACTGGATGGAGCACCCAAATTCCCAACTACAACCCCGTCG 2155096 Query 219041 ACATCATTGACAACGTCAAGCGTCTCATATCTGGCAAGGAGATGGTACCGATGTCTCCGT 219100 ||||| |||||||| || |||||| || || | ||| |||||| |||| | || | Sbjct 2155095 ACATCGTTGACAACCTCCGGCGTCTAATGCGGGGAGAAGAGTTGGTACAGATGACCCCCT 2155036 Query 219101 GGT 219103 ||| Sbjct 2155035 GGT 2155033 Score = 100 bits (110), Expect = 6e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 ||||| || ||||| ||||||||||||||||| ||||| | || ||||| | | Sbjct 3175486 GGTTCGCTTTCGGGCGGTTGGAAGATGAAGCTCGCCCTTGCCCGTGCCATCATCTTCAAG 3175427 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 ||||| | || || || || ||||| ||||||||| ||||| | |||| | ||||| Sbjct 3175426 GCCGACATTCTCCTTCTGGACGAGCCCACCAACCACCTGGACGTCGTCAACATCACCTGG 3175367 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878 || ||| |||||| || || | ||| | || |||| |||||||||||||| Sbjct 3175366 CTCGTGGACTACCTCACGTCGCTCACGAACTGCACGTCTATCATGGTCTCTCACGACTCG 3175307 Query 279879 GGCTTCCT 279886 | |||||| Sbjct 3175306 GACTTCCT 3175299 Score = 89.7 bits (98), Expect = 1e-12 Identities = 165/237 (70%), Gaps = 10/237 (4%) Strand=Plus/Plus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174 ||||| ||| |||| || || ||||| || ||||| || ||||| || | |||| || Sbjct 3047121 CTGCGACTGGTCGATGAACGCTCCACGGTCGGCAGCAAGCTCAATGACGGCCTTCTGCGA 3047180 Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGA---CATCA-GGATGAATGCCAATAACCT 293230 ||||||||| |||||||| | ||||||| ||||| ||||| || || | Sbjct 3047181 GATCTCCCAGACCGTCTTGTAAATGGCCTTGATGTCATCAGGGATG-TTGGGTAT---GT 3047236 Query 293231 TCTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCAC 293290 ||||||| || || | |||||||||||| |||||||||| | ||| ||| | ||| Sbjct 3047237 TCTGGATCGAACCACGGTTGGCAATAATGAGGTTCTTCATGTTGTCGTCCCAGATGCCAA 3047296 Query 293291 GAGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAG 293347 | || || ||||| | ||| | | | || || |||| ||||| |||||| Sbjct 3047297 GGTTGATCAGGTCGCGCAGAAGCCAGGGGCACACGACCTGGAAGTCACC--CGAGAG 3047351 Score = 89.7 bits (98), Expect = 1e-12 Identities = 159/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 280701 ACTCACT-CTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGC 280759 |||||| |||| || || ||||| ||||| |||||||||||||| ||||| | || || Sbjct 3174463 ACTCACAACTCG-ATGCGTGGTCTGTCTGGTGGCCAGAAGGTCAAGGTTGTCCTTGGTGC 3174405 Query 280760 AGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCG 280819 || |||| | ||| ||| | ||| | |||||||| |||||||| || ||||| Sbjct 3174404 CGCCACCTGGCGCCGCCCCCACATTATCTGCTTGGACGAGCCCACCAACTACCTCGACCG 3174345 Query 280820 CGAGAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCAT 280879 |||| || | |||||| | || || || | | || | || || ||| | ||||| Sbjct 3174344 CGAGTCGCTCGCCGCTCTCACCGCCGCCCTCAAGAACTTCGAGGGTGGTGTCCTTGTCAT 3174285 Query 280880 TTCTCACAGCACAGAATTTGTC-AAGTCTGTGTGCTCCGAGATGTGG 280925 | | |||| || || | || || || ||| ||||| ||| | ||| Sbjct 3174284 TACCCACAACA-AGGAGTTCTCGGAGGGTGTCTGCTCTGAGGTTTGG 3174239 >seq1 Length=5253760 Score = 100 bits (110), Expect = 6e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 279693 CCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTA 279752 || |||| || || ||||||||||||||||||||||| | ||| | | || || || Sbjct 2172413 CCCGTAGCCTCGCTATCGGGTGGTTGGAAGATGAAGCTCGAGCTCGCCAGAGCTATGCTC 2172472 Query 279753 CTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTA 279812 | | ||||| | || || || |||||||| || |||||| | ||| | || Sbjct 2172473 ATCGGCGCCGACATTCTCCTCCTCGATGAGCCGACTAACCACCTCGACGTTCAGACTGTC 2172532 Query 279813 GCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCAC 279872 |||||||| | | |||||| | | | || || || ||| ||||| || || ||| Sbjct 2172533 GCCTGGCTTGAGAACTACCTCAACGGCCTCTCCAACGTCACTTGTCTCATCGTGTCGCAC 2172592 Query 279873 GACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAG 279920 ||||| |||||||| || ||||||| | | ||| || ||||| ||| Sbjct 2172593 GACTCCGGCTTCCTTGACAACGTGTGCACGGACATTATGCACTACGAG 2172640 Score = 100 bits (110), Expect = 6e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| || ||||| | ||||||||||||||||||||| || Sbjct 4413054 TCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAAGGGGTTGGTC 4412995 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | || | |||||| | ||| || || |||| | |||||| || || ||||| | Sbjct 4412994 GAGTTCCAGATCTTGGGGTTGCCGAGGGCGACGAGCAGGCGGTCGGCGACGAACTCGATG 4412935 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGCCTCACAGAT 251741 ||||| | ||| || | | ||||||||| || | ||| | |||| ||||| || Sbjct 4412934 TACTGGCACATGAGCTTGGCGTTCATGCCGAT-AAGCGAGACGGGAAGGGCCTCGGTGAG 4412876 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTC 251768 ||| |||| ||| | | || ||||| Sbjct 4412875 GAACTCCTGCTCGATCTCGACGGCCTC 4412849 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 |||||||| || ||||| ||||| || ||||| ||||| ||||| |||| || || ||| Sbjct 2172890 GGTGTCATCGGTCCCAACGGTGCTGGCAAGTCGACCCTCATCAAGCTCCTCACCGGTGAG 2172949 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGA--AGCATCCCAACATGCGGATGGCTTACGTCG 280287 ||| ||| ||||| | || || | |||| || | || | | ||||| | Sbjct 2172950 ACCGTCCCCAACGAGGG--CAGTGTGCACAAGCACCCGGCTCTCCGTGTCGGCTACGTTG 2173007 Query 280288 CTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTC 280347 |||||||||| |||||||||||| | | ||||| || | |||| | ||| ||||| | Sbjct 2173008 CTCAGCACGCGTTCCACCACATCAACCAGCACCTCGAGAAGACTGCCGTCCAGTACATCC 2173067 Query 280348 AGTGGCGCTA 280357 ||||||| || Sbjct 2173068 AGTGGCGTTA 2173077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836589293456