Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 136 4e-27 seq6 122 8e-23 seq3 116 4e-21 seq7 104 2e-17 >seq1 Length=5253760 Score = 136 bits (150), Expect = 4e-27 Identities = 299/447 (67%), Gaps = 21/447 (5%) Strand=Plus/Plus Query 47133 GCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCG 47192 ||||| || | ||||| ||||| |||||||||| |||||||||||||| || || Sbjct 4412630 GCCGAGCGCCTCATCGCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCC 4412689 Query 47193 GCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTA 47252 |||| || | | || | || |||||||||| || || || |||||||| Sbjct 4412690 TCGATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAACGAGCTT 4412749 Query 47253 ATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGT 47311 || ||| | ||||| ||||| |||||| |||| || || ||| || || | || | Sbjct 4412750 ATTTCGCGCGACGAGGGCCTCCACACCGACTTCGCATGCCTCCTCTTCACCCACCTCCGC 4412809 Query 47312 CGATCAAAAGTTGGACGTGCCCACCGTCAGC-----GACATGTT--TGC-CGAAGCCGTC 47363 || || |||||| | | || | | | | | ||| |||||| Sbjct 4412810 CGC------------CGCCCCCACCCGGACCTTATTGAGAAGATCATCCGCGAGGCCGTC 4412857 Query 47364 GCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCG 47423 | || ||| |||||| || ||||||| || |||| || | | || |||||||| Sbjct 4412858 GAGATCGAGCAGGAGTTCCTCACCGAGGCCCTTCCCGTCTCGCTTATCGGCATGAACGCC 4412917 Query 47424 GAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTAT 47483 || | ||| | |||||||||| || |||||||||||||||||||| || | Sbjct 4412918 AAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAAC 4412977 Query 47484 CCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGC 47543 |||||||| | || | || || ||||| || ||| | | || |||||| ||||| Sbjct 4412978 CCCAAGATCTGGAACTCGACCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGC 4413037 Query 47544 AAGACCAACTTTTTCGAGAAGCGCGTC 47570 ||| ||||||| |||||| ||||||| Sbjct 4413038 AAGGCCAACTTCTTCGAGTCGCGCGTC 4413064 >seq6 Length=960230 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || ||||| ||||| ||| | ||||| || || ||||| || ||| Sbjct 925542 GTAGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCAAGCTGCTTGCCA 925601 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 925602 GCAAAGATGAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTG 925661 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | |||||| || | ||| | ||| |||||||||||||| Sbjct 925662 ACGTTG-TCGATCGTGTCTGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAGAGT 925720 Query 127096 TTTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 925721 CTTGACGAAGATCTGCATG 925739 Score = 96.9 bits (106), Expect = 3e-15 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| ||| | ||||| || || ||||| || || Sbjct 925770 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCGAGCTGCTTGCCG 925829 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| |||||||| ||||||||||||||| || || |||| Sbjct 925830 GCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 925889 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 | |||| |||| ||||||| |||||| || | ||| | || |||||||| || Sbjct 925890 ACGTTG-TCGATAGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAG 925945 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/215 (71%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 126880 TACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTA 126939 |||||| || || || | || | ||| | || | ||| ||||| || ||||| ||||| Sbjct 925228 TACTGC-CCGCCACGGAGACGGAGCACGAGGTGCAACGTCGACTCCTTCTGAATGTTGTA 925286 Query 126940 ATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATC 126999 || || ||| || || || ||||| || || ||| | || | |||||||| || Sbjct 925287 GTCCGACAGCGTACGCCCGTCCTCCAGCTGCTTGCCGGCGAAAATAAGGCGCTGCTGGTC 925346 Query 127000 GGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTAC 127058 |||||| ||||||||||||||| ||| || ||||| |||| || | ||||| | Sbjct 925347 GGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG-TCAATCGTGTCAGAGG 925405 Query 127059 TCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGA 127093 |||||| |||| || | || ||||| |||||| Sbjct 925406 ACTCGACCTCGAGCGTAATGGTCTTGCCAGTCAGA 925440 >seq3 Length=2509747 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || ||| Sbjct 987469 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 987410 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| ||||| || ||||||||||||||| ||| ||| |||| Sbjct 987409 GCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 987350 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| |||||||| |||||| |||| || | || ||||| || || || Sbjct 987349 ACGTTGT-CGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTGAGGGT 987291 Query 127096 TTTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 987290 CTTGACGAAAATCTGCAT 987273 >seq7 Length=796062 Score = 104 bits (114), Expect = 2e-17 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| |||| | |||||||| ||||| || |||||||||||| Sbjct 392349 TCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTG 392290 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| |||| ||||| | |||||| |||| ||| | Sbjct 392289 TCCTGGATCTTGGACTTGACGTTG-TCGATCGTGTCGGAGGACTCGACCTCGAGGGTGAT 392231 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| |||||||| || || || |||||||| Sbjct 392230 GGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 392195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500704899840