Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 163 3e-35 seq1 129 7e-25 seq4 100 3e-16 >seq2 Length=4144821 Score = 163 bits (180), Expect = 3e-35 Identities = 556/857 (65%), Gaps = 17/857 (2%) Strand=Plus/Plus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || ||||| || || ||||| || ||||||| |||||| | | |||||| || Sbjct 3047887 GGGAGGGCAATCGAGGCCAGGTTGCACACAGCAACCTCATCGGGAGACGAGTACTCGATG 3047946 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || || | || || ||| |||||||| | || || || || ||||| | | Sbjct 3047947 ATCTCGGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTCGAG 3048006 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || ||| |||||||||||||| | || || ||||| || |||| || || || Sbjct 3048007 TTGGCCGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCAGTCTGGGCCTCCAGGATG 3048066 Query 116605 GCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 116663 || ||| | | || ||| || | | || | | | ||||| ||| ||||| Sbjct 3048067 GCGAACCAGAGCTTCTGCGCCTTGATC-GTCTTGCGGCCCTTGCCCTCACGCTCATACTT 3048125 Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC--TCTGAGAGCCCTGGTGCCTTATCT 116721 |||||| ||| ||||| || | | || || | || || || || | | Sbjct 3048126 CTCGTAGAGCTGCTCGAACTCCTC--CGAGTGCACATCGGCAAGGCCGGGGCACTCAGCA 3048183 Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781 || || | ||| | ||| | || | ||| || ||||||||||||||||| |||||| Sbjct 3048184 GGGCACATGAGGGTCCAGTCTCCGTCGGACTCGACGCGCTTCATGAAGAGGTCCGGGATC 3048243 Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCA 116839 ||||| || ||||||| || ||| ||| || ||| || | || || || || | Sbjct 3048244 CAGAGAGCGTAGAAGAGGTCACGA--GCGCGCATCTCCTCCTTGCCGTGGTTCTTGCGGA 3048301 Query 116840 ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCT 116899 || | || || | | || ||||||||||| || ||||| | || | | || Sbjct 3048302 GGTCAAGGAAATCAAACACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCGG 3048361 Query 116900 TGCGACGA---CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTG 116956 ||| ||| |||||| || || | || || |||| | | || ||||| | Sbjct 3048362 GGCGCTTGTTGCCACCCTGGTCAACGTAGCGGGCAGTCGCGTCGTAGGCACGGAGCATAG 3048421 Query 116957 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGAC 117014 | | ||||| | || | ||| || || || ||| |||| | | |||| | | Sbjct 3048422 GGACAATACCGTTCGAGTAGCCGTTGGTACCGGCAATGTACGAACCCT--TGGCGCGAAT 3048479 Query 117015 ATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAG 117074 | ||||||||| | ||||||||| || || ||| ||||| || ||||| | |||| Sbjct 3048480 GTTGTGGATGTGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCGCAGGTCTTGAG 3048539 Query 117075 ACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACAT 117134 | || |||| || || || || ||||| |||| | |||| |||||||| |||||| Sbjct 3048540 AGTGTCGTAAATGCCGTCAATGGAGTCGTCCTTCATGGCGACAAGGAAGCACGACGACAT 3048599 Query 117135 TTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG 117194 || | || ||||| ||||||||||| || || | |||||| |||| | | Sbjct 3048600 CTGCGCGTGGGGAGTACCGGCGTTGAAGAGAGTGGGCGACGCGTGAGTGAAGTAGCGCTC 3048659 Query 117195 GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254 |||||| | ||||||||| | ||| | || || || |||||||| |||| | Sbjct 3048660 GGACATGAGGTTGTAGGTCTCGATGACGCGGTCAAGGTTCTCGCCGTGAATGCCGACAGC 3048719 Query 117255 GACCCGCATAAACATGT 117271 || ||||| | ||||| Sbjct 3048720 AACGCGCATGAGCATGT 3048736 Score = 105 bits (116), Expect = 8e-18 Identities = 234/341 (69%), Gaps = 15/341 (4%) Strand=Plus/Plus Query 176593 CAACTTGAGGAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTG 176652 || ||| |||||||| || ||||||||| || | |||| |||||||||||| || || Sbjct 2156009 CATCTTCAGGAGGGAGGGGTAGAAGTAGTCGAGGAAGTTGATGATGAGACCCTTGATATG 2156068 Query 176653 TGAACCATCGTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCGAA-GCT-CGGAA 176710 ||||||||||| ||| || ||||| ||||||||| |||| ||||||| ||| || Sbjct 2156069 TGAACCATCGTGGTCCTGGTCAGTCATGATCATGAGCTGACCGTAGCGAAGGCTGTCCAA 2156128 Query 176711 ACATCTTGATAATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGA-GATCATTGAA-CT 176768 | | | ||| | | | || | ||||||| |||| ||||| | || |||| || Sbjct 2156129 AGAGGT--ATAGTTGTGATTGTGCTTCAGACCCAGGATCTGCTTGATGTTC--TGAATCT 2156184 Query 176769 CTTGGTTTGATGTGAGTTG--CGCCACTGAAGCGTCGCGGACATTTTTACACTTCCCGCG 176826 | || ||| || || ||| || || |||||||| ||| ||||| Sbjct 2156185 CGACATTCTTCATGATCTGCTCGTGGCTG--GCCTCACGGACATTGAGCAGCTTGCCGCG 2156242 Query 176827 GAGAGGGAACACACCGTAGTGATCACGACCAACCA---CAGAGAGACCAGCAACTGCGAG 176883 ||||| || |||||| | | || || || | | || ||| || | || ||||| Sbjct 2156243 AAGAGGAAAGACACCGAAATTGTCGCGCCCCCCGATGGCACCGAGGCCGGACACAGCGAG 2156302 Query 176884 GGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACT 176924 | ||| ||||||||||| || || | |||||| ||||||| Sbjct 2156303 TGCCTTGGCGGAATCACCTTCAGTGAGGATGAGGGTACACT 2156343 >seq1 Length=5253760 Score = 129 bits (142), Expect = 7e-25 Identities = 346/524 (66%), Gaps = 4/524 (1%) Strand=Plus/Minus Query 127240 GACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCATAAAATCAAA 127299 ||| ||| |||||||||||| | ||| || | ||| ||| ||||||| || || || Sbjct 4413064 GACGCGCGACTCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAA 4413005 Query 127300 TGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGAC 127359 ||||| | |||||||| || | || || | ||| || || || | ||| Sbjct 4413004 GGGGTTGGTCGAGTTCCAGATCTTGGGGTTGCCGAGGGCGACGAGCAGGCGGTCGGCGAC 4412945 Query 127360 GTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGA-GCG 127418 | |||| ||||||| |||| || | |||||| ||||| || | | |||| | | Sbjct 4412944 GAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGATAAGCG-AGACGGGAAGGG 4412886 Query 127419 CGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTGAATAGTGT 127478 | || || |||| ||| ||| || || || || || || | ||| | |||| || Sbjct 4412885 CCTCGGTGAGGAACTCCTGCTCGATCTCGACGGCCTCGCGGATGATCTTCTCAATAAGGT 4412826 Query 127479 CCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAACTCTTGGTGGAGAC 127538 || || | ||| | ||||||| || || || |||||| | Sbjct 4412825 CCGGGTGGGGGCGGCGGCGGAGGTGGGTGAAGAGGAGGCATGCGAAGTCGGTGTGGAGGC 4412766 Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 ||||||| || || || || || ||||||||| ||||| ||||| || || ||||||| Sbjct 4412765 CCTCGTCGCGCGAAATAAGCTCGTTCGAGAAGGTAAGACCGGGCATAAGGCCGCGCTTCT 4412706 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658 | | |||||| |||| || ||||| ||||||||||| ||||| || ||||||| Sbjct 4412705 TGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGCAGCGAACG 4412646 Query 127659 CAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACTGT 127717 | | || |||||||| || || || | | || | | ||| || |||||| | Sbjct 4412645 CGATGAGGCGCTCGGCGAACGA-CGAGCTGTCGTCCGAGATCCAGCGCAGCGCCCAGTCG 4412587 Query 127718 GCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAG 127761 ||||| |||| ||| || |||| ||||| || || | ||||| Sbjct 4412586 GCCTTCTTCTTGATGCAGGGGATGGTCTCAATGGCCTTGAAGAG 4412543 >seq4 Length=2250194 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | ||||| ||||| |||||||| || || |||| ||| || Sbjct 1041445 GCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGCTGAAGGTCAGGCCG 1041504 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||| || || |||||||| | |||||| || || |||||| |||||||||||||| Sbjct 1041505 CGCATCAGCCCGCGCTTCTTGAGCCAGAAGATTGCTGCAAATGACCCAGAGAAGAAGATG 1041564 Query 127640 CCCTCCACACACGCGAACGC 127659 ||||||||||| || || || Sbjct 1041565 CCCTCCACACAAGCAAATGC 1041584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507077298560