Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq6 141 1e-28 seq3 138 1e-27 seq7 136 4e-27 >seq6 Length=960230 Score = 141 bits (156), Expect = 1e-28 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||| || || || | ||| |||||| || || |||||||||| Sbjct 925510 TGCCGCCGCGGAGACGCAGAACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGG 925569 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||||||| |||| || ||||||||||| || || || | ||||||||||| | | Sbjct 925570 AGAGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGTG 925629 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | || |||||||||| |||||| |||||| ||| | | | |||||| ||| || Sbjct 925630 GAATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATCGTGTCTGACGACTCG 925688 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | ||||| || ||||| ||||| || || || ||||| ||||| Sbjct 925689 ACCTCAAGGGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 925738 Score = 134 bits (148), Expect = 2e-26 Identities = 149/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| || ||||| || |||||| || || |||||||| || || || ||| | Sbjct 925245 ACGGAGCACGAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTACGCCC 925304 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || ||||||||||||||||| || | |||||||||||||| || | || |||||| Sbjct 925305 GTCCTCCAGCTGCTTGCCGGCGAAAATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTT 925364 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| |||||| ||| | | | |||||| || || || || | ||| | Sbjct 925365 GTCCTGGATCTTGCTCTTGA-CGTTGTCAATCGTGTCAGAGGACTCGACCTCGAGCGTAA 925423 Query 46557 TGGTTTTGCCCGTCAG 46572 |||| ||||| ||||| Sbjct 925424 TGGTCTTGCCAGTCAG 925439 Score = 123 bits (136), Expect = 3e-23 Identities = 132/172 (77%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| ||||||||| |||| |||||||||||||||||||| Sbjct 925775 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCGAGCTGCTTGCCGGCGAA 925834 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||||||| ||||| ||||| ||| Sbjct 925835 GATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 925893 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | | ||||| || || || || | |||||||| ||||| || || Sbjct 925894 TGTCGATAGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAG 925945 >seq3 Length=2509747 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||| ||||| Sbjct 987464 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 987405 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||||| || | || |||||||||| ||||||| ||||| ||| Sbjct 987404 GATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 987346 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || || | |||||||| |||||||| || || || | Sbjct 987345 TGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTGAGGGTCTTGA 987286 Query 46581 CAAAGATTTGCAT 46593 | || || ||||| Sbjct 987285 CGAAAATCTGCAT 987273 >seq7 Length=796062 Score = 136 bits (150), Expect = 4e-27 Identities = 139/179 (78%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || || ||||| |||| |||||||||||||||||||| || | ||||||| Sbjct 392372 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCT 392313 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCG 46534 |||||| || | || |||||||||| |||||| ||||| ||| | | | ||||||| Sbjct 392312 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATCGTGTCG 392254 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || | |||||||| ||||||||||| || || || ||||| ||||| Sbjct 392253 GAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 392195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238286952320