Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 333 3e-86 seq3 143 3e-29 seq2 125 7e-24 seq6 122 9e-23 seq4 102 8e-17 >seq1 Length=5253760 Score = 333 bits (368), Expect = 3e-86 Identities = 549/786 (70%), Gaps = 21/786 (3%) Strand=Plus/Minus Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAG 132722 ||| || || |||||||||| | ||| || ||||| |||||| || ||||||| Sbjct 4413016 CATGAAGTCGAAGGGGTTGGTCGAGTTCCAGATCTTGGGGTTGCCGA---GGGCGACGAG 4412960 Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCA 132781 ||| | |||||| |||||||||||||| || ||||| | || || | | | || | | Sbjct 4412959 CAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATG-CCGATAA 4412901 Query 132782 GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 | || || || || |||||||| || |||||||| |||| || ||| || || Sbjct 4412900 GCGAGACGGGAAGGGCCTCGGTGAGGAACTCCTGCTCGATCTCGACGGCCTCGCGGATGA 4412841 Query 132842 TTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAA 132901 | | | || | ||| | || || | | || |||| | | ||| || | Sbjct 4412840 TCTTCTCAATAAGGTCCGGGTGGGGGCGGCGGCGGAGGTGGGTGAAGAGGAGGCATGCGA 4412781 Query 132902 AGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCA 132961 ||||| || | ||||||||| | ||||| || ||||| ||| || | ||||||| Sbjct 4412780 AGTCGGTGTGGAGGCCCTCGTCGCGCGAAATAAGCTCGTTCGAGAAGGTAAGACCGGGCA 4412721 Query 132962 TGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCT 133021 | |||||||| || |||||||| || || | |||||| |||||| ||||||| ||||| Sbjct 4412720 TAAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAGATGCCCT 4412661 Query 133022 CGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGC 133081 ||||||| ||||| || | ||||||||| |||||| | | | | |||||||| Sbjct 4412660 CGACGGCAGCGAACGCGATGAGGCGCTCGGCGAACGACGAGCTGTCGTCCGAGATCCAGC 4412601 Query 133082 GCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAAC 133141 |||||||||| |||||||| | |||| ||| || || || || ||||| || | | | Sbjct 4412600 GCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCAATGGCCTTGA--AGAG 4412543 Query 133142 GGAGTTTCTCTTCCGAGGA-----ACGCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 | |||| | || | | ||| | ||||||||||||||| || || | || Sbjct 4412542 GTAGTTGC---GGCGGGCACCGTCACGGATGTAGGTGTCGATGAGAAGAGAGTAGGTCTC 4412486 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 ||||| | ||||||||| ||| || |||||||| ||| | |||||| | | ||| Sbjct 4412485 AGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGGTCTTGGCCTCGGCGATCTG 4412426 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 || || ||| |||||||| || || ||||||||||||||||| |||||||| Sbjct 4412425 GACCTCACCGCAGAAGCGCTCGACAAGGTTCTCGTTGACGATGCCGTCTGACGCGGCGAA 4412366 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTC 133373 ||||| |||||||||| |||||| | ||||||||||||||| | | |||||||| Sbjct 4412365 GAAGGCGAGCACGTGCTCGATGAAGTAGCGCTCGTTGTCGTTGAGCTTGTTGTCCCAGTC 4412306 Query 133374 GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTT 133433 | | ||| | |||| | ||||||| ||||||| || ||||||| || || || Sbjct 4412305 GTGGAGGTCGGGCGCGAGGTTGATCTCCTCGGCGGTCCAGAAGGACGCCTGCGCCTTCTT 4412246 Query 133434 GTACAT 133439 |||||| Sbjct 4412245 GTACAT 4412240 >seq3 Length=2509747 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| |||||||| |||| |||||| || | Sbjct 987273 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 987332 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| || ||| ||||||| Sbjct 987333 GACACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 987391 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 987392 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 987451 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||| || || | || || ||| | | ||||| Sbjct 987452 CATCCAGAAGGAGTCGACCCTCCACCTCGTTCTTCGTCTTCGCGGCGG 987499 >seq2 Length=4144821 Score = 125 bits (138), Expect = 7e-24 Identities = 185/259 (71%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 107544 CCCAGATCGTCCCTGTCCGTGTGCACGACCAGACTCCGTCCGATGATGCTGTGCGGGCCG 107603 ||||| |||||| || || ||||||||| | || || || || | ||||||| | ||| Sbjct 546830 CCCAGGTCGTCCGTGCCCTCGTGCACGACGACACCACGCCCAATTACGCTGTGCTGCCCG 546771 Query 107604 TACAAAGTCACGACGCCGTCCGTCAAGCTCACCTCGGTGAGCGCGTCGCGGCCCGCCGAC 107663 ||| ||||| || |||| | | | || || || |||| | ||||| Sbjct 546770 CACAGGCGCACGAGGCAGTCCTTGATTTCGATCTTGGCGACGCCGTCCGCGTCCGCC--- 546714 Query 107664 TTGAGGTTGCCCAGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTGGTCGCGC 107723 |||| ||| || ||||| || ||||||| | ||| | || || |||||||| ||| | Sbjct 546713 TTGATGTTACCGAGGTCACCCACGTGCCGGTTCTTGTCGGACGGGGCGCCGTGATCGTG- 546655 Query 107724 TTCGTC-GGGTTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAACTC 107782 | || |||||| | ||| |||| | ||| |||| |||| ||| |||||||||||| Sbjct 546654 TCCGAAAGGGTTGTAGTGCGCGCCTGTGGACATGCACCCGTCGCTGAGGTCGCCGAACTC 546595 Query 107783 GTGCACGTGGAAGCCGTGC 107801 ||||||||||||||||||| Sbjct 546594 GTGCACGTGGAAGCCGTGC 546576 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 107669 GTTGCCCAGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTGGTCGCGCTTCGT 107728 |||||||| |||||| | ||| | | | | | ||||| |||||||||| || ||| Sbjct 600358 GTTGCCCATGTCGCCCATGTGACGGTTGCGGTCTTCGGGTGCGCCGTGGTTCCGGTTCAG 600299 Query 107729 CGGGTTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAACTCGTGCAC 107788 |||||| | ||| | || | ||| |||| || | |||| ||||||||||| ||| || Sbjct 600298 CGGGTTCCAGTGCACCCCCGTCGAGTTGCATCCCTGGCTCAGGTCGCCGAACTGGTGTAC 600239 Query 107789 GTGGAAGCCGTGCAGGCCG 107807 ||| | ||||||||||||| Sbjct 600238 GTGCATGCCGTGCAGGCCG 600220 >seq6 Length=960230 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || |||||| | || |||||| | | Sbjct 925738 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACCCTTGAGGTCGAGTCGTCA 925679 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || |||| ||||| ||||| ||||| | ||||| Sbjct 925678 GACA-CGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCACCTGACCA 925620 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || ||||| ||||| || |||| |||||| ||| ||||||||| Sbjct 925619 GCAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGCACTCTCTCCGACTACAA 925560 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||| || ||||| | || || || | || |||||| | | |||||| Sbjct 925559 CATTCAGAAGGAGTCTACCCTCCACCTCGTTCTGCGTCTCCGCGGCGGC 925511 Score = 118 bits (130), Expect = 1e-21 Identities = 153/208 (74%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA-GCGTGCAAACGCTTAA 38323 || || ||||| ||||| || |||| |||||| || | |||| | || |||| | | Sbjct 925439 CTGACTGGCAAGACCATTACGCTCGAGGTCGAGTCCTCTGACACGATTGACAACG--TCA 925382 Query 38324 AGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGG 38382 ||| || |||| ||||| ||||| || || ||||||| ||||| || |||| ||| | Sbjct 925381 AGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTTATTTTCGCCG 925322 Query 38383 GCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGC 38442 |||| |||||||| |||| ||| || || ||||||||||| || ||||| ||||| Sbjct 925321 GCAAGCAGCTGGAGGACGGGCGTACGCTGTCGGACTACAACATTCAGAAGGAGTCGACGT 925262 Query 38443 TGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| | ||||| ||| | | ||||| Sbjct 925261 TGCACCTCGTGCTCCGTCTCCGTGGCGG 925234 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||| ||||| ||||||||| | || |||||| || | |||| | | |||| | || Sbjct 925945 CTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACTATCGACAACG-TCAA 925887 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || | ||||| ||||| || || ||||||| ||||| || || | ||| || Sbjct 925886 GTCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTTATCTTCGCCGG 925827 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| |||||| ||| |||||||||||| || ||||| | || || Sbjct 925826 CAAGCAGCTCGAGGACGGGCGCACTCTCTCCGACTACAACATTCAGAAGGAGTCCACTCT 925767 Query 38444 GCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || | || || ||| | | |||||| Sbjct 925766 CCACCTTGTCCTTCGTCTTCGTGGCGGC 925739 >seq4 Length=2250194 Score = 102 bits (112), Expect = 8e-17 Identities = 149/208 (72%), Gaps = 7/208 (3%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||||||| |||| |||||| || | || ||||| ||||||||||| |||| | Sbjct 1041442 CATGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGCTGAAGGTCAGG 1041501 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 ||| |||| || ||||| || |||||||| || || || || || || || |||||| Sbjct 1041502 CCGCGCATCAGCCCGCGCTTCTTGAGCCAGAAGATTGCTGCAAATGACCCAGAGAAGAAG 1041561 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC- 133073 | |||||| || || || || | |||||| || |||| ||| ||| | ||| Sbjct 1041562 ATGCCCTCCACACAAGCAAATGCGATGAGGCGCGTGCGGAAC--GGCATCT---CAGGCG 1041616 Query 133074 -GATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||| | |||||||| |||||||| Sbjct 1041617 TGATATACTTGAGCGCCCAGTCGGCCTT 1041644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172699965440