Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001712445.1_202016 -08-24] 16 sequences; 19,908,169 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1 105 5e-18 >seq1 Length=5253760 Score = 105 bits (116), Expect = 5e-18 Identities = 239/348 (69%), Gaps = 15/348 (4%) Strand=Plus/Plus Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105 |||||||| |||| || ||||||||||| ||| ||||| | |||||| |||| Sbjct 2748670 GGGTTCCACGCGCTCATGATGATGCGCCGGTCGGTCGGGTTTTCCCTGATCTTCCGCACG 2748729 Query 30106 GCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG---TA 30161 | || || ||||| ||||| || |||| | |||||| | | || | |||| || Sbjct 2748730 AC-TTCCGCGAGCTGGTCCACGCCTTTCCCGGTGTAGTC-GTCTTC--GCACGTGCCATA 2748785 Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221 | | || ||||| || | ||||||||| |||||||| || || ||||| ||||| ||| Sbjct 2748786 CGCAGCGCCGAAGTGGCGCCACTGGAAGCCGTACACGGGCCCGAGGTCGCCCTCGCGCCT 2748845 Query 30222 GTGCTCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30280 ||| || ||||| | ||| | || || | || ||||| |||||||||| | | Sbjct 2748846 GTGGCCG-AGCCCGACGCGGTCGAGGAACTCGCGCGACCCGTTCCCGTCCCAGATGTGCA 2748904 Query 30281 --CCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30338 || | | || | |||| | | || ||| | || ||||||||| || ||||| Sbjct 2748905 CGCCGCGTGCTTG--GAGCACCGCCGCGTCGGTGCAGCCCGCGACGAACCAGAGGAGCTC 2748962 Query 30339 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAG-GGGAA 30385 || |||||| | ||| ||||| | || ||||| || || ||||| Sbjct 2748963 TTCGACGACGCCGCGCCAGAAGACGCGTTTCGTCGTCAGCAGCGGGAA 2749010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617520319568